KEGG   Caulifigura coniformis: Pan44_40110
Entry
Pan44_40110       CDS       T09806                                 
Symbol
uvrB
Name
(GenBank) UvrABC system protein B
  KO
K03702  excinuclease ABC subunit B
Organism
ccos  Caulifigura coniformis
Pathway
ccos03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ccos00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    Pan44_40110 (uvrB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ccos03400]
    Pan44_40110 (uvrB)
DNA repair and recombination proteins [BR:ccos03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Pan44_40110 (uvrB)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      Pan44_40110 (uvrB)
SSDB
Motif
Pfam: UvrB_inter UvrB_3rd UvrB Helicase_C ResIII UVR DEAD AAA_22 AAA_30 AAA_16 AAA_7 Kinesin UB2H
Other DBs
NCBI-ProteinID: QDT55962
UniProt: A0A517SIM3
LinkDB
Position
complement(4865438..4867564)
AA seq 708 aa
MPSFELSSQFAPAGDQPQAIEALVRGLKEGKRDQVLLGATGTGKTFTMANVIAQAQRPAL
VLAHNKTLAAQLYGEFRDFFPNNAVSYFVSYYDYYQPEAYIPQRDIYIEKDASINEEIDR
LRLLATSALVSRRDVIVVASVSCIYGLGSPKDYLEMMVPITVGQTIDRDEMLRKLVDIQY
ERNDFEPSRGKFRVRGDVIEVWPAYEEFAYRIELWGDEVDKLSIIDPVTNAESKSLNEIY
VYPAKHFVLPQSRIDAAMGEIESELEDQLAKFKAEGKLLEAQRLHARTRHDIELMRELGY
CPGIENYSRALGGRKKGEPPFTLYDFFPQDFLLFVDESHATVPQVRAMFNGDQARKTTLV
DHGFRLPMALDNRPLKFEEWNERRGQAIYVTATPADWELEKAEGEVVEQIIRPTGLVDPV
ISIHPARGQVPHLVEQIRIRAEREERVLVTTLTKRLSEDLVNYLKEEGVRCEWLHSELNA
IERWEILRELREHKFDAVVGVNLLREGLDLPEVSLVCIMDADKEGFLRSATSLIQTIGRA
ARNVNAEVILYADQVTDSMQKAIEETNRRRSLQLKYNAEHGITPETIRKAIRRGIEEELE
ARRVVQEAAGLKSETQYITQEFLGELEAEMLRAAENLEFERAAQLRDRVVELRKQVGQHV
PVLAIDAYTPEEGDENRPGFARSGGGKGRKRGDASPKSRGRVPRPRKN
NT seq 2127 nt   +upstreamnt  +downstreamnt
atgccttccttcgagctctcgtcccaattcgctccggccggagaccagccgcaggccatc
gaggctctcgtccgaggcctgaaggaagggaaacgcgaccaggttctgcttggagcgacg
ggaacgggcaagacgttcaccatggcgaacgtcatcgcccaggcgcaaaggccggcgctc
gttctggctcacaacaagacgctcgccgcgcagctctacggcgagtttcgcgatttcttt
cctaacaacgcggtcagctacttcgtcagctactacgactactaccagcccgaggcctac
attccgcagcgggacatctacatcgagaaagacgcctcgatcaacgaggagatcgaccgc
ctccggctgctcgcgaccagcgccctcgtcagccggcgcgatgtgattgtcgtcgccagc
gtctcgtgcatttacggcctcggttcgccgaaggactacctggaaatgatggtcccgatc
accgtcgggcagaccatcgaccgggatgagatgctccggaagctggtcgacatccagtac
gagaggaatgatttcgagccctcgcggggaaagttccgtgtgcggggagacgtcatcgaa
gtgtggcccgcctacgaagagttcgcctaccgcatcgaactctggggcgacgaggtcgac
aagctgtcgatcatcgatccggtcacgaatgccgaatcgaagtcgctcaacgagatctac
gtctacccggccaagcacttcgtgctgccgcagagccgcattgatgcggccatgggagag
atcgagagcgaattggaggaccagctggcgaagttcaaggccgaaggaaagctcctcgaa
gcacagcggctccacgcgcggacccggcacgacatcgaactgatgcgcgaactggggtat
tgcccgggcatcgagaattacagtcgcgcgctcggcggccggaagaaaggggagccgccg
ttcacgctgtacgacttcttcccgcaggacttcctgctgttcgtggacgagtcgcacgca
accgtcccgcaggtgcgcgcgatgttcaatggcgaccaggcgcggaaaacgaccctcgtg
gatcacggatttcggctgccgatggccctcgacaaccgtccgctcaagttcgaggaatgg
aatgaacgtcgcgggcaggccatctacgtcaccgcgactccggccgactgggaactggaa
aaggccgaaggggaagtcgtcgaacagatcatccgtccgacgggcctcgtcgatcccgtg
atcagtatccacccggcgcggggccaggtgccacacctcgtggagcagatccgtatccgg
gcggaacgtgaagaacgggtcctcgtcaccacgctgaccaagcgtctctccgaggatctc
gtcaactacctgaaggaagagggcgttcggtgcgagtggctgcactcggagctgaacgcg
attgaacgctgggagattctccgcgagttgcgtgagcacaagttcgacgcggttgtcggg
gtcaacctgctccgcgaaggactcgacctgcctgaagtatcgctcgtctgcatcatggat
gccgacaaggaaggcttcttaaggagcgccacgagcctgatccagacgatcggacgcgct
gcccggaatgtgaatgccgaggtgatcctgtacgccgaccaggtaaccgacagtatgcag
aaagcgatcgaagaaacgaatcgacgccgctccctgcaactgaaatacaacgccgaacac
ggcatcacgcccgaaacgatccgcaaggcaattcgtcgtggcattgaggaggaactggaa
gcccgacgcgtggtgcaggaagcggccggcctgaaatcggaaacccagtacatcacccag
gaattcctgggtgaactcgaagcggagatgctgcgggctgctgagaacctcgaattcgag
cgagccgcgcaacttcgtgatcgggtcgtcgaactcaggaagcaggtcggccagcacgtt
ccagtgctggcaatcgatgcctacacccccgaggaaggcgacgagaacaggccgggattc
gccaggagtggcggagggaaggggcggaaacggggtgacgcctctccgaaatcgcggggg
cgcgttcccaggccgcggaagaattga

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