Caulifigura coniformis: Pan44_42720
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Entry
Pan44_42720 CDS
T09806
Symbol
fliA_4
Name
(GenBank) RNA polymerase sigma factor FliA
KO
K02405
RNA polymerase sigma factor FliA
Organism
ccos
Caulifigura coniformis
Pathway
ccos02020
Two-component system
ccos02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
ccos00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Pan44_42720 (fliA_4)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Pan44_42720 (fliA_4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccos03021
]
Pan44_42720 (fliA_4)
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
ccos02035
]
Pan44_42720 (fliA_4)
Transcription machinery [BR:
ccos03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Pan44_42720 (fliA_4)
Bacterial motility proteins [BR:
ccos02035
]
Flagellar system
Flagellar assembly proteins
Stator
Pan44_42720 (fliA_4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
HTH_23
HTH_28
HTH_24
MarR
Sigma70_ECF
HTH_10
UPF0122
MarR_2
DUF1492
Motif
Other DBs
NCBI-ProteinID:
QDT56220
UniProt:
A0A517SJB6
LinkDB
All DBs
Position
complement(5188835..5189548)
Genome browser
AA seq
237 aa
AA seq
DB search
MEAIARAYRHVASRNSRDQLIVDHLEFVRHVLGRIVSGLPKGIDCENLEAAGVLGLVEAA
GQFDAARGVAFKTYSFPRIRGAILDELRRNCPLPQQMLQRWSVIRRAAGGTTSLPDSEIL
AQRTGLSIDEIDECMEAIRLTRPESWREEMSSGGVYHRVDPAEGIEKADQSRLLADAIEQ
LPRTDRLVVSMYHLDDMRLKEIGEVLNLSESRVSRILSRAEQRLRDSMRRREVRRLA
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atggaagccatcgctcgagcctaccgccacgtcgccagtcgcaacagccgcgaccagttg
atcgttgatcacctggagttcgtgcggcacgtgctcggccgaatcgtgtccgggcttccc
aaggggatcgactgtgaaaacctcgaggccgcgggagtgctgggccttgtggaagcagca
ggccagttcgacgccgctcgcggagtggcgttcaagacctattcattcccgcgcattcgc
ggagcgatcctggatgaactgcgccgcaactgtccgcttccccagcagatgctgcagcgc
tggtcggtgatccgccgcgccgcgggcgggacgacgtcgcttcctgattccgaaatcctc
gcccagcgcaccggcctgtcgatcgacgagatcgatgagtgcatggaagcgattcgcctc
acacggcccgagagctggcgcgaggaaatgtcgtccggcggcgtctatcaccgggtcgac
ccggctgaaggcatcgagaaggcggaccagtcgcgccttctggcagatgccattgagcag
ctcccccgcacggacaggctggtggtctcgatgtaccacctggacgacatgcggctgaag
gagattggagaagtgttgaatctctccgaatcgcgggtgagccggattctctcccgagcg
gagcagcggttgcgggattcgatgcgtcgtcgtgaagtcaggcgcctcgcctag
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integrated database retrieval system
