Caulifigura coniformis: Pan44_45560
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Entry
Pan44_45560 CDS
T09806
Symbol
pcrA_2
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ccos
Caulifigura coniformis
Pathway
ccos03420
Nucleotide excision repair
ccos03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ccos00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Pan44_45560 (pcrA_2)
03430 Mismatch repair
Pan44_45560 (pcrA_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccos03400
]
Pan44_45560 (pcrA_2)
Enzymes [BR:
ccos01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Pan44_45560 (pcrA_2)
DNA repair and recombination proteins [BR:
ccos03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Pan44_45560 (pcrA_2)
MMR (mismatch excision repair)
Other MMR factors
Pan44_45560 (pcrA_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
PcrA_UvrD_tudor
AAA_22
AAA_11
DUF3553
AAA_16
Motif
Other DBs
NCBI-ProteinID:
QDT56501
UniProt:
A0A517SK64
LinkDB
All DBs
Position
complement(5512806..5515163)
Genome browser
AA seq
785 aa
AA seq
DB search
MSLNDDLTPSQRAAVEHEDGPLLVLAGPGSGKTRVVTRRIARLIQRGVSPRQILAITFTN
KAALTMRQRVEQLAPGAGVWVSTFHRFAAMLLRRHAEVVGLRPNYTILDESDQRKGLKLV
MEEIGLDFSHYPPDRMAARISQLKNDLTTAEAFTQRYEEGIGNNWDQAVARVYPEYQRFL
LASNAVDFDDLLLHVAFMLSEHEVLRQQLDHRYRYVLVDEYQDTNAAQYRIVAALSQQHP
NLQATGDPDQSIYAWRGARIENILRFEREFPDSRVIKLEENFRSTQAIVRSADRLIGYNK
QRKAKKLITNNDEGESVELITFDDAVAESAGIARRIRELSEQHGLTWSDFAIFYRVNALS
RQLEVGLMRERIPYQVAAGAAFYDRAEIKDTLAYLRLVANPADRTAFYRAVNTPLRGLGE
TSQRRLSAWADANGVGLIEACERSAEVPKLSKNAARGFRMFADMISRFDLATRGSVADLL
TEIVERSGMAAAWSGSPREEDVQRLGNVEELITAARQYDEAFGDERSIDGFLEQTALVAD
ADTIDDTAGRVTLMTMHSAKGLEYPVVFVLGVEEGLIPHERALRDLSGFELEEERRLLFV
GMTRAKQRLFLTQTRLRTFRGRTLASIPSLFASEFEATRVDESHGTPQVYFDRDAFNEPE
EQPEPAEPPVDPPTMAKNASVADARPLLMSGADLLNGGKPSGTVNPNRFSEGMLVRHPRY
GLGTIVEISRVTSRTNVTVKFTHEDRIQTFIAEKSPLQPVGVKPVAEPAPARAATPDEAS
PGVPF
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
gtgtccctgaatgacgacttgacgcccagccagcgcgcggccgtcgaacacgaagacggc
cccctgctggttctcgccggccccggttcgggaaagacccgtgtcgtcacccgccgcatc
gcccgtttgatccaaaggggcgtctccccgaggcagatcctcgcgatcaccttcaccaac
aaagccgcgctgacgatgcggcagcgcgtggaacagctcgcccccggcgccggcgtctgg
gtcagcacgttccaccggttcgccgccatgctcctcaggcgacacgccgaggtcgtcgga
ctccgccccaattacacgatcctcgatgaatccgatcagcgaaaaggcctcaagctggtc
atggaggagatcggactcgatttctcccactacccgcccgaccgcatggcggcccgcatc
agtcagctcaagaacgacctgacgaccgccgaggcgtttacacagcgctatgaagaagga
atcggcaacaactgggaccaggcggtcgcccgcgtttatcccgagtatcagcggttcctc
ctcgcctcgaacgccgtcgatttcgacgacctgctcctgcatgtcgcgttcatgctcagt
gaacacgaagtcctcaggcagcagctcgaccatcgctatcgctacgtcctggtcgacgaa
taccaggacaccaacgccgctcagtaccgcatcgtggcggccctctcgcagcagcatccc
aacctgcaggccacgggcgatcccgaccagtcgatctacgcctggcgcggggcccgcatt
gaaaacatcctgcgtttcgaacgtgagtttcccgactcccgcgtcatcaagctcgaagag
aacttccgcagcacccaggccatcgtccgctcggccgaccgcctcatcggctacaacaag
cagcgcaaagccaaaaagctcatcacgaacaacgatgagggcgaatccgtcgaactgatc
accttcgacgacgccgtagccgagtcggccggaatcgcccgccgcatccgcgagctctcg
gaacagcatggactcacctggagcgacttcgcgatcttctatcgcgtcaacgccctctcc
cggcagctcgaagtcggcctgatgcgggaacggattccctaccaggtcgcggccggggcc
gccttctacgaccgggctgaaatcaaggatacgctcgcctacctccggctcgtggcgaat
cccgcagatcgcacggccttctaccgcgccgtgaacacccccctccgcgggctcggtgaa
acctcgcagcgccgcctttccgcctgggctgatgccaacggagtcggcctgattgaagcc
tgcgagcggtccgctgaagtcccgaagctgtccaagaacgcagctcgcggcttccgcatg
ttcgccgacatgatcagccggttcgatctcgccacccgcggatcggtcgcggacctgctc
acggaaatcgtcgagcggagcggcatggcggccgcctggtcgggaagcccgcgcgaagaa
gatgtccagcggctcggcaacgtcgaggaactcatcaccgcggcccggcagtatgatgag
gcgtttggcgacgaacgctcgatcgacggcttcctcgagcagacggcactcgtcgccgac
gccgacaccatcgacgatacggccggccgggtcacgttgatgacgatgcattccgcaaag
ggactggagtacccggtcgtcttcgtgctcggcgtcgaagaaggtctgattccccacgaa
cgggcactgcgcgacctttccgggttcgagctcgaggaagagcggcggctgctgttcgtc
ggaatgacccgcgccaagcagcgattgttcctcacccagacccgcctgcggactttccgt
ggacggacgctcgcctccatccccagcctgttcgcctcggagttcgaagccacgcgcgtc
gacgaatcgcatgggacaccgcaggtctacttcgaccgcgatgctttcaatgaaccggag
gaacagccggaacccgccgagccgccggtcgacccgccgacgatggcgaagaacgcctcg
gtggccgacgcccgccctctgctgatgagcggcgccgacctgctgaacggcggaaaaccg
agcggaacagtgaacccgaaccgcttcagcgaagggatgctggtgcgccatccccgttac
ggcctggggacgatcgtcgagatcagccgcgtgacctcgcggacgaacgtgacggtcaag
ttcacgcacgaagatcgaatccagacgttcatcgccgaaaagtcgcccctgcagccagtg
ggcgtcaaacccgtcgccgagccagcgccagcccgcgccgcgacgcccgacgaagcctcc
cccggcgtcccgttctag
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