Capsulimonas corticalis: CCAX7_31090
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Entry
CCAX7_31090 CDS
T08728
Symbol
rfaD
Name
(GenBank) ADP-L-glycero-D-manno-heptose-6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
ccot
Capsulimonas corticalis
Pathway
ccot00541
Biosynthesis of various nucleotide sugars
ccot01100
Metabolic pathways
ccot01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
ccot00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
CCAX7_31090 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
ccot01005
]
CCAX7_31090 (rfaD)
Enzymes [BR:
ccot01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
CCAX7_31090 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
ccot01005
]
Core region
CCAX7_31090 (rfaD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
NmrA
NAD_binding_10
Ldh_1_N
Motif
Other DBs
NCBI-ProteinID:
BDI31058
UniProt:
A0A402CSJ5
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All DBs
Position
complement(3682158..3683123)
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AA seq
321 aa
AA seq
DB search
MIVVTGAAGFIGSVVVSALNAAGHEDLLLVDTLGSEGKFKNLRAKAYRDIIDPIAFLEAL
PEIAEEIDAIVHLGAITDTSAPDADAMLDSNTHYTQLLAQIALENDIRFIYASSASVYGD
GALGFSDDDALTPSFKPLNPYAFSKWLFDAMAIRHGWTDKIVGLRFFNVFGPNEYHKARM
ASVIWHAYRQVQETGKIKLFQSHKAEYADGAQERDFIHVDDLSKVILFFLEHPEANGIFN
LGTGKARSFNDLAAAIFQSLGKEPQIEYIPTPENIRNAYQYFTEADLTKLRAAGYDEEFL
SLEEGVDRYIQGYLVKDDPYV
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgatcgtcgtcacaggagccgccgggtttatcggcagcgtcgtcgtcagcgcgttgaac
gcggcgggacatgaagacctattgctggtcgatacgctcggatcggaaggcaagttcaaa
aacctgcgcgccaaagcgtaccgggacatcatcgacccgatcgcgtttttggaagcgctg
ccggagatcgccgaagagatcgacgccatcgtgcatctgggcgcgatcacggacacatcg
gcgcccgacgcggacgcgatgcttgacagcaacacgcactacacgcaactgctcgcgcag
atcgcgctggagaacgatatccgcttcatctacgcctccagcgccagcgtctacggcgac
ggcgcgctgggcttcagcgatgatgacgcgctgaccccgagcttcaaacctctcaacccc
tacgccttctccaagtggctgttcgacgcgatggcgatccgccacggctggacagacaag
atcgtcggcctgcgcttcttcaacgtcttcggccccaacgaataccacaaggcgcgtatg
gcgtcggtcatctggcacgcctatcgccaggtgcaggagacgggcaagatcaagctgttc
cagtcccacaaggccgaatacgccgacggcgcgcaggagcgggacttcatccatgtggac
gatctcagcaaggtgatcttattcttcctggagcatccggaagcaaacggcatctttaac
ctgggaaccggcaaagcgcgctcgttcaacgacctcgccgccgcgatcttccaatcgctg
ggcaaagagccgcagatcgaatacatccccaccccggagaatattcgcaatgcgtatcag
tatttcacggaagccgacctgacgaagctgcgcgcggcggggtatgacgaggagttcttg
agtctggaagagggcgtggatcggtatattcagggatatttggtaaaggacgatccttac
gtttag
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