Capsulimonas corticalis: CCAX7_50870
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Entry
CCAX7_50870 CDS
T08728
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
ccot
Capsulimonas corticalis
Pathway
ccot03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ccot00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CCAX7_50870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccot03400
]
CCAX7_50870
Enzymes [BR:
ccot01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
CCAX7_50870
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
CCAX7_50870
DNA repair and recombination proteins [BR:
ccot03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CCAX7_50870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Auto_anti-p27
NFACT_N
DUF7573
Zn_ribbon_8
DUF883
Motif
Other DBs
NCBI-ProteinID:
BDI33036
UniProt:
A0A402CP61
LinkDB
All DBs
Position
complement(5993404..5994231)
Genome browser
AA seq
275 aa
AA seq
DB search
MPELPEVETLRRGLARRLTGRTITGGRVLVPKMVKGSVEDPDEFLARVTGSKIESIGRRG
KYLIFSLDSGYYLLLHLKMRGQIVVVPSEKPVDKYLAVALEIDGSEEMRFHDMWTWGEIR
FMDSSELADHSGLSAMGAEPLSESFTTAVFGEALRRKARTTIKAALLDQSVVAGVGNIYA
DESLFRSGIRPTRVAGSLSDGDVERLRGQIRAVLEAATGDGGTLSDNYVDADGNAGRYTP
QVYDRGGQPCDHCGAILERLRVAGRGTVFCPVCQG
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
gtgccggaactgccggaagttgagacgctgcggcgagggctggcgcgccgtttgacggga
cgaaccatcacgggaggccgtgttctggttccgaagatggtgaaggggagcgtggaggat
ccggacgagtttctcgcccgcgtcactggctccaagattgaatccatcggacgtcgcggg
aaatacttgattttttcgttggattctgggtactatctactgttgcatctcaagatgcgc
ggtcagatcgttgtcgttccgagcgaaaagccggtagacaaatatctggcggttgcgctg
gagatcgacggttccgaagagatgcgttttcatgatatgtggacctggggtgaaatccgg
ttcatggattcgagtgaactcgccgatcattccggcctttcagccatgggagcggagccg
ttatcggaaagttttacaacagccgtcttcggcgaggcgcttcgtagaaaagcgcgcacg
acgatcaaagccgcgctgctcgaccagagcgtggtggcgggtgttggaaatatatacgcg
gatgagtcgctgtttcgttccggaattcggccgacgcgtgtagcaggttcgctgagcgat
ggggatgtcgagcgcctgcgcggccagatccgcgcggtgctggaggcggccactggagac
gggggcacgctgagcgacaattacgtggacgccgatggtaacgctggtcgttatacgccg
caagtctacgatcgaggcggacaaccgtgcgaccattgcggagcgatactggagcgcctt
cgggtagcgggacggggaaccgtcttctgcccggtgtgccagggttag
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