Entry |
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Name |
(GenBank) ribonuclease II
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KO |
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Organism |
ccot Capsulimonas corticalis
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Brite |
KEGG Orthology (KO) [BR:ccot00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:ccot03016]
CCAX7_64840
Enzymes [BR:ccot01000]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
CCAX7_64840
Transfer RNA biogenesis [BR:ccot03016]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
CCAX7_64840
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SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
complement(7480174..7481616)
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AA seq |
480 aa
MSTFDLHAAARRAMLGAGFPIEFAPATLEQAQHPASVDDDGARDLRGLLWSSIDNPDSRD
LDQVEVAEAQSDGSVRLMVGIADVDAFAPLGSPLDRAAAERTTTVYTGVENFPMLPRDLS
EGATSLWDGQDRLAMVTELHVGPDGNVLESGIYRAWVRSRAKLSYDSVGAWLEGAPLVPE
AIAATPGLAAQLRTQDAVSMHLRKVRLSAGALEFDTIEARPVLENGRVVDLAVTPRGHAR
YLIENFMVAANTAVSGFLQSHSFPSIQRIVRRPARWERIVELARPLGEALPAEPDAVALS
GFLTRRKAADPDHFPDLCLSVVKLLGPGEYTVVPAGGDLGEHFGLAVYGYTHSTAPNRRY
IDLVTQRLLKAACIDAPCPYSLDELTAIAAHCNERASAAQRVERILRKSAAAVLLHGRIG
ETFTAIVTGVKAQGTYVRLVAPPVEGRIMHGERGLDVGDRVHVRLTNVDPEQGFIDFERV |
NT seq |
1443 nt +upstreamnt +downstreamnt
atgtccacgtttgacctccacgccgccgcccggcgcgcaatgctcggcgccgggttcccg
atcgaatttgcgcccgccaccctggaacaggcgcagcatcccgcttcggtggatgacgac
ggggcgcgagacctgcgcggcctgctctggtcgtcaatcgacaatccggattcgcgggat
ctggaccaggtggaggtcgcggaggcgcagtccgacgggagcgtgcggctgatggtcggc
atcgcggatgtggacgcgttcgcgccgctcggttcgccgctggaccgggcggcggccgag
cgcacgacgaccgtttacacgggcgtcgagaactttcccatgcttccgcgcgatctctcc
gagggagcgacttcgctgtgggacggccaggaccgcctcgcgatggtgacggagctgcat
gtcggtcccgacggcaacgtgctggaaagcgggatttaccgcgcctgggtgcgcagccgc
gccaagctgtcctacgattccgtcggcgcctggctggaaggcgccccgcttgtcccggaa
gccattgcggcgacgccgggattggcggcgcagctgcgcacgcaggacgctgtttcgatg
catctgcgcaaagtgcgcctgtcggcgggcgctctggagttcgacaccatcgaggctcgt
ccggtgcttgagaacggccgcgtggtcgatctggcggtgactccgcgcggccatgcgcgc
tatttgattgagaacttcatggtggcggcgaacacggccgtttccgggtttctccaatcc
cattcgtttccatccatccagcgcatcgtgcgccggccggcgcgctgggagcgcatcgtg
gagctggcgcgcccgctcggcgaggcgctcccggcggagccggacgcggtggcgctttcc
gggtttctcacccgccgcaaagccgccgatcccgaccatttccccgacctgtgcctgagc
gtcgtcaagctgcttggtccgggtgagtacaccgtggtcccggcgggcggcgacctgggc
gagcacttcggcctcgccgtgtacggctacacgcactcgacggcgcccaaccggcgctat
atcgatctggtgacccagcgtcttctcaaagccgcgtgcatcgacgcgccctgtccctac
tcgctcgacgagctgaccgcaatcgcggctcactgcaacgagcgcgcgagcgcggcgcag
cgcgtggagcggatcctgcgcaaatccgccgccgccgtactgctgcacggccgaatcggc
gagacatttacggcgatcgttaccggcgtcaaagcgcaggggacctatgtccgtctcgtc
gcgccgcccgtcgaaggccgcatcatgcacggtgaacgcggactcgacgtcggcgaccga
gttcacgtccgcctgacaaatgtcgatccggaacagggatttatcgacttcgaacgtgtg
tga |