Capsulimonas corticalis: CCAX7_65810
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Entry
CCAX7_65810 CDS
T08728
Name
(GenBank) hypothetical protein
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
ccot
Capsulimonas corticalis
Pathway
ccot03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ccot00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CCAX7_65810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccot03019
]
CCAX7_65810
03009 Ribosome biogenesis [BR:
ccot03009
]
CCAX7_65810
Enzymes [BR:
ccot01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CCAX7_65810
Messenger RNA biogenesis [BR:
ccot03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CCAX7_65810
Ribosome biogenesis [BR:
ccot03009
]
Prokaryotic type
rRNA helicases
CCAX7_65810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
BDI34530
UniProt:
A0A402CQZ2
LinkDB
All DBs
Position
7602501..7604921
Genome browser
AA seq
806 aa
AA seq
DB search
MSPKPSAPKADTESTAAAPSAPKRTIVVPAVREPLTIEQMRTPERSPARKKVIVVMSGAK
RTTRPAADRVADETNADEESTVMHAPTSDDAGYEFSETTDNELEAGDADELFESASSEEF
EPTDDGSLVSDVELAAEEEEIEEEALTFDAPESQEPETVAEAPHSDEQAPAVEASASDES
ASAPEAVEEPKPSPKKTPPAPKAVPIASEPVDRTPPAVKALKAKKAAPAADAVAVAAPVD
ASADDAEPIKFSDLGLSEQVLKAISDLGFEAPTAIQAGAIPPLLAGRDLIGQAQTGTGKT
AAFALPLVQMVDPKSNAIQAIILEPTRELAIQVADGIHKFAKYAGLSVVPVYGGQPLDRQ
FRALRAGAHIVVGTPGRVLDHLRRGSIALDQVRFCVLDEADEMLALGFLEEVETILAELP
EERQTAFFSATMAPRVMALTQQFLKNPQRVKIESKRRTVDTTRQTYYEVPQGRKLEALGR
VLDMETPGPTIVFCRTRQQCNELAESLRLRGYLAEPLHGEMGQPERDRVMKRFREGLADM
LIATDVAARGLDIETVTHVINYELPWDIEQYIHRIGRTGRAGRSGDAITLVEGRERRQLQ
AIEKMIGTQIKPVRIPSAADITARRREALAESLRETLTSGEFDGHMATVESLTSEYDASE
IAAAALYLLWKDRHSAPPDTAEELAADSEQPEAGMVRLFVSLGRQDNLRPGDLVGAITNE
AGLTGRQIGAIDIMDRTSFVEVPANFVPKVIAALNATTLRGKNVSAGVAHPDENPRGNNR
PGSGGNRPSFGGRGPGGGGFNKFNKR
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atgtctcccaagccaagcgctccgaaagccgacacggaatcgaccgccgccgcgccgagc
gcgccgaagcgcacgattgtcgttccggccgttcgcgaaccgctgacgatcgagcagatg
cgcactcccgagcgctctccggcgcgcaagaaagtcatcgtcgtgatgtccggcgccaag
cgcaccacgcgcccagccgccgaccgcgtagccgacgagacgaacgctgatgaagaatcg
acagtgatgcacgccccgacgtcggacgacgccggctatgagttttcggagacgacggac
aacgagctcgaagccggcgacgccgatgagctctttgaatccgcatcgtccgaagagttc
gaacctacggacgacgggtccctcgtcagcgatgtagaactcgccgctgaagaagaggag
attgaggaggaagcgctgaccttcgacgctcccgaatcgcaagagccggagacagtcgcc
gaagcgcctcactcggacgagcaggcgccggctgtcgaggcgtccgcctccgacgaatcg
gcgagtgcgccggaagccgttgaggagccgaagccttctcccaaaaagacgccgcccgcg
ccgaaggccgttccaatcgcgtctgagcccgtggatcgcacgccgcccgccgtcaaagcg
ctgaaggcaaagaaagcggcgcccgccgccgacgccgtcgctgtggcggctcccgtggac
gcatccgccgacgacgccgagccgatcaaattctcggacctcggcctttcggagcaagtg
ctgaaggcgatctccgacctgggcttcgaagcgccgacggcgattcaggcgggcgcgatt
ccgccgctgcttgccgggcgcgacttgatcggacaggcgcagacgggcacgggcaagacc
gccgcgttcgcgctgccgctggtccagatggtcgatcctaagtcgaacgcgatccaggcg
atcattctggagccgacgcgcgaactggcgatccaggttgccgacggcatccataagttc
gccaaatacgccggcctgagcgtcgtccccgtgtacggcgggcagccgctcgaccgccag
ttccgcgccctgcgcgccggcgcgcacatcgtcgtcggaacgcccggccgcgtgctcgac
cacctccggcgcggctcgatcgcgctcgatcaagtccgcttctgcgtgctggacgaagcc
gatgagatgctggcgctgggcttcctagaggaagtcgagacgatcctggccgaactgccc
gaagagcgccagacggcgttcttctccgccaccatggcgccgcgcgtgatggcgctgacg
cagcagtttttaaagaacccgcagcgcgtcaagatcgagtccaagcgccgcaccgtggac
accacgcgccagacctactacgaagtgccgcagggccgcaagctcgaagcgctcggccgc
gtgctggacatggagacgcccggcccgaccatcgtcttctgccgcacccgacagcagtgc
aacgaactcgcggaatccctgcgcctgcgtgggtatctcgccgagccgctgcacggcgaa
atgggacagccggagcgtgaccgcgttatgaagcggttccgtgaaggtctcgccgacatg
ctgatcgccaccgatgtcgccgcgcgcggcctggacatcgagacggtcacgcacgtcatc
aactacgagctgccctgggacatcgagcagtacatccaccgcatcggccgcacgggccgc
gcgggacgctccggcgacgccatcacccttgtcgaaggccgcgaacgtcgccagctgcaa
gccatcgagaagatgatcggcacgcagatcaaacccgtccgcatcccaagcgccgcggat
atcaccgcccgccgccgcgaagcgctggccgaatccctgcgcgaaaccctgacgagcggc
gagttcgacggccatatggcgacggtcgagtcgctgacctcggagtacgacgcgagcgaa
atcgccgccgccgccctttatctgctttggaaagaccgccacagcgcgccgccggacacc
gccgaggaactcgcggcggactccgagcagcccgaagccggcatggtgcgattgttcgtc
agcctcggccggcaggacaacctgcgacccggcgatctcgtgggcgccatcaccaacgaa
gccggcctcaccggccgccagatcggcgcgatcgacatcatggaccgcacctccttcgtg
gaagtcccggccaacttcgtccccaaagtcatcgcggccctcaacgccaccaccctgcgc
ggcaaaaacgtcagcgccggcgtcgcccaccccgacgaaaacccgcgcggcaataaccgc
cccggctctggcggcaaccgccccagcttcggcggacgcgggccgggcggcggcggcttc
aataagttcaacaagcggtag
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