Corynebacterium confusum: CCONF_01145
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Entry
CCONF_01145 CDS
T09352
Symbol
topA
Name
(GenBank) DNA topoisomerase 1
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ccou
Corynebacterium confusum
Brite
KEGG Orthology (KO) [BR:
ccou00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ccou03032
]
CCONF_01145 (topA)
03400 DNA repair and recombination proteins [BR:
ccou03400
]
CCONF_01145 (topA)
Enzymes [BR:
ccou01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
CCONF_01145 (topA)
DNA replication proteins [BR:
ccou03032
]
Prokaryotic type
DNA Topoisomerases
CCONF_01145 (topA)
DNA repair and recombination proteins [BR:
ccou03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CCONF_01145 (topA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
WJY88793
LinkDB
All DBs
Position
230107..233145
Genome browser
AA seq
1012 aa
AA seq
DB search
MAEASDTSGKTLVIVESATKAKKIQPYLGDDYIVEASVGHIRDLPRGASDVPSKYKKESW
ARLGVNPEDDFTPLYVISADKKKKVADLKAKLKQCDQLFLATDPDREGEAIAWHLLEVLK
PKVPVRRMVFNEITKSAILEAAENTRELDENLIDAQETRRILDRLYGYEVSPVLWKKVMP
RLSAGRVQSVATRVIVERERERMAFIAADYWDLAADLDTGNSGSEEPRTFSARLAAVDGQ
RVAVGRDFDDRGRVKNDDVVVLGQEQAEALADGLSGQSVSVASVEHKPYTRKPYPPFMTS
TLQQEAGRRLHFTSERTMRIAQRLYENGHITYMRTDSTSLSKQGLNAARNAATSIYGQEY
VASSPRVYDRKVKNSQEAHEAIRPAGESFATPGQLSGQLDAEEFRLYDLIWKRTVACQME
DAKGTSMKVTVAGTAATGNEVDFTATGRTITFPGFLKAYEDPSNPGKGGKNGKNDKDDAS
KRLPQLREGQGLTIADLKAEGHSTNPPARYTEASLVKKMEDLGIGRPSTYASIIKTIQDR
GYVVSRGNALVPSWVAFAVTGLLENNFTELVDYDFTSSMEDELDAIAAGNQDRTQWLKDF
YFGNAQVGQQKAASVARHGGLKSLIDVNLEQIDARQVNSLKLYTDSEGRDVVVRVGRYGP
YIERVIGRDEETGEPVYQRANLSETTTPDELTEQLAEKLFATPQGGRELGENPANGRMVV
AKEGRFGPYVTEVVRDDERATAEAEAEEVVAKERAEEDAQRAAEGKRAKNWETKTAAKQK
EKRVAQYIDEKLKPGTASLFSSMEPSEVTLDEALKLLSLPREVGVDPSDGEIITAQNGRY
GPYLKKGTDSRSLANEEQIFSITLDEARRIYAEPKRRGRQAAQPPLKQLGDNDVSGKPMT
VKDGRFGPYVTDGTTNASLRKGDKPEAMTDARANELLSERRAKEAANGGSKASKKAGKKT
SKKSTKKSTKKTAKKSTKKSTKKAGKKSTTKTAKKPSPGTKNVVKAGSRRSK
NT seq
3039 nt
NT seq
+upstream
nt +downstream
nt
gtggcagaagcttccgacacgtcgggcaagaccctggtcatcgtagagtcggcgaccaag
gcgaaaaagatccagccgtatttgggcgacgactacatagtcgaagcctcggttggtcac
atccgggatcttccccgcggggcgtcagacgtaccgtcgaaatacaagaaggagtcttgg
gcgcgcttgggcgtgaacccggaggacgacttcacgccgctgtacgtgatcagcgctgac
aaaaagaagaaggtcgcggacctcaaagccaagctgaagcagtgcgatcagctcttcctc
gcaacagaccccgaccgcgagggcgaggccatcgcctggcacctgctcgaggtgctcaag
cccaaggtgccggtgcgccgcatggtcttcaacgagatcactaagtccgccatcctggag
gcggctgaaaacacccgcgagctggacgagaacctcatcgatgcccaggagacccgacgc
atcctggaccgcctctacggctacgaggtctccccggtgctgtggaagaaggtcatgccg
cgcctgtcggccggccgcgtgcagtcggtggccacccgcgtcatcgtcgagcgcgaacgc
gagcgcatggcgttcatcgccgccgactactgggatctggccgccgatctggacaccggc
aacagcggatccgaggagccgcggaccttctccgcccgcctggcggccgtcgatggccag
cgcgtggccgtcggccgcgacttcgacgaccgcgggcgcgtcaagaacgacgacgtcgtg
gtgttgggccaggagcaggccgaggccctggccgacgggctgagcggccagtcggtgagc
gtggccagcgtggagcacaaaccctatacccgcaagccctacccgccgtttatgacctcg
accctgcagcaggaggcgggtcggcgcctgcacttcacgtcggagcgcaccatgcgcatt
gcgcagcgcctctacgaaaacggtcacatcacctatatgcgtaccgactccacctcgctg
tccaagcaggggctgaacgcggcccgcaacgccgcgaccagcatctacggccaggaatac
gtcgccagctccccgcgcgtttatgaccgcaaggtcaaaaactcccaggaggcccacgag
gccatccgcccggccggcgagtccttcgccaccccggggcagctatccggccagctggac
gcggaggagttccgcctctacgacctcatctggaagcgcaccgtcgcctgccagatggag
gacgccaagggcacctccatgaaggtcacggtggccggcacggccgccaccggcaacgag
gtggacttcactgccaccggccgcacgatcaccttcccgggcttcctgaaggcctacgag
gacccgagcaacccgggcaagggaggcaagaacggcaagaatgacaaggacgatgccagc
aagcgcctgccccagctgcgtgaaggccaggggctgaccatcgccgatctcaaggccgag
ggccactcgaccaacccgccggcccgctacaccgaggccagcctggtcaaaaaaatggag
gacctgggcatcggccgcccgtcgacgtacgcgtccatcatcaagaccatccaggaccgc
ggctacgtggtctcccgcggcaacgccctggtgcccagctgggtggcgtttgcggtcacc
gggctgctggagaacaacttcaccgagctggtggactacgacttcacctcctcgatggag
gacgagctggacgccatcgcggctggcaaccaggaccgcacccagtggctgaaggacttc
tacttcggcaacgcgcaggtgggccagcagaaggcggcatcggtggcgcgccacggcggc
ctgaagtcgctcatcgacgtcaacctggagcagatcgatgcccgccaggtcaactccctg
aagctctacaccgactccgagggccgggacgtggtggtccgcgtgggccgctacggcccg
tacatcgagcgcgttatcggccgcgacgaggagaccggggagccggtctatcagcgcgcc
aacctctcggagaccaccaccccggacgagctgaccgagcagctggccgagaagctgttc
gccaccccgcagggcggccgtgagctgggcgagaacccggccaacggccgtatggtggtg
gcgaaggagggtcgcttcggcccgtacgtgaccgaggtggtccgtgacgacgagcgcgcc
accgcggaggcggaggccgaggaggttgtcgccaaggagcgcgccgaggaggacgcgcag
cgtgcggccgagggcaagcgcgccaagaactgggagaccaagaccgcggccaagcagaag
gaaaagcgggtagcccagtacatcgacgagaagctgaagccgggcacggcctcgctgttt
agctcgatggagccgtctgaggtcaccctggacgaggccctcaagctgctgtcgctgccc
cgcgaggtgggcgtggacccgtccgacggggagatcatcacggcccagaacggccgttac
ggcccctacctgaagaagggaacggattctaggtcgcttgccaacgaggagcagatcttc
agcatcaccctggacgaggcccgccgcatctacgcggagccgaagcgccggggccgccag
gccgcgcagccgccgctgaagcaactgggcgacaacgacgtctccggaaagccgatgacg
gtcaaggacggccgcttcggcccctacgtcaccgacgggaccaccaacgcctccctgcgc
aagggcgataagcccgaggccatgaccgacgcgcgcgccaacgagctgctctcggagcgc
cgagccaaggaggccgccaacggcggttccaaggccagcaagaaggcgggcaagaagacg
agcaagaagtcgactaagaagtcgacgaaaaagacggccaagaagtcgacgaagaaatcg
accaagaaggccggcaagaagtccacgacgaagacggccaagaagccgtcgccgggcact
aagaacgtggtgaaggcgggttctcgccggtcgaagtag
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