Corynebacterium confusum: CCONF_03315
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Entry
CCONF_03315 CDS
T09352
Symbol
uvrD1
Name
(GenBank) ATP-dependent DNA helicase UvrD2
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ccou
Corynebacterium confusum
Pathway
ccou03420
Nucleotide excision repair
ccou03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ccou00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CCONF_03315 (uvrD1)
03430 Mismatch repair
CCONF_03315 (uvrD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccou03400
]
CCONF_03315 (uvrD1)
Enzymes [BR:
ccou01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CCONF_03315 (uvrD1)
DNA repair and recombination proteins [BR:
ccou03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CCONF_03315 (uvrD1)
MMR (mismatch excision repair)
Other MMR factors
CCONF_03315 (uvrD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
HRDC
UvrD_C_2
AAA_30
Viral_helicase1
DUF6011
AAA_11
Motif
Other DBs
NCBI-ProteinID:
WJY89219
LinkDB
All DBs
Position
699281..701356
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AA seq
691 aa
AA seq
DB search
MAPDAKFSLDLSQLDEDQRVAATAPRGPVCILAGAGTGKTRTITYRIAHLVEQGFVSPQR
VLAVSFTTKAAGEMRDRLESMGVGGVQARTFHSAARRQLKYFWPQVAGDLPWAMVDKQFS
LVGRAVNRAGVENTKETVGDLKEEIKWAKSCLLTPGTYAENIAKLGRKAPVSPDKVAAVY
QAYEDLKTRPDGVLLDFEDLLLHVAGALENVPAVAEEFRSQYRSFVVDEYQDVTPLQQRV
LDAWLGERDDLTVVGDANQTIYSFTGASPDNLLNFSRKYPNATVIKLQRDYRSTPQITDL
ANRVIGQASGRAAGTRLELQGMREPGPEPQFQDYESEEAEAQEVAGKILSLLNDGVPAKE
IAVLYRINSQSEPFEQALADAGVVYQVRGGEGFFNRAEIREGVRELVRATRRDDLPADPV
AVARAAFAPLGLSEREPDGAQARERWQSLSALVDLIRHLVDNRPGIDLPGVVAQLQERAR
NKQNPVMEGVTLATFHAAKGLEWDAVFLVGLSEKLLPLNHAIKSGNAEDIEEERRVFYVG
ITRAREHLLCSWARAKTTGARASRERTRFLDGIVQDQVADAPSRRSRRRSSCRVCGRPLA
TPAEKSLGRHEFCASDVDEELFARLRAWRKDVAAEAQVPAYVIFSDATLLAIAEQLPTDE
AALLSVSGVGPSKMEKFGAEILSLVSSHVAG
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
gtggcaccagacgctaagttcagtctcgacctcagccagctggacgaggaccagcgggtc
gcggccacggccccgcgcgggccggtgtgcatcctggccggcgccggcaccggcaagacc
cgcaccatcacctaccggatcgcgcacctggtggagcagggcttcgtcagcccgcagcgc
gtgctggcggtgtcttttaccaccaaggccgccggggagatgcgcgaccggctcgagtcc
atgggcgttggcggcgtgcaggcgcgtaccttccactccgcggcccgccggcagctgaaa
tacttctggccacaggtggccggggatctgccctgggccatggtggacaagcagttctcc
ctggtcgggcgggccgtcaaccgggcgggcgtggaaaacacaaaggagaccgtgggggat
ctcaaagaagagatcaagtgggccaagtcctgccttctcaccccgggtacgtacgccgaa
aacatcgccaagctgggccgcaaggccccggtgagcccggataaggtcgcggcggtctac
caggcctacgaggacctaaagacccgcccggacggcgtcctgctggactttgaggacctg
ctgctgcacgtggccggggcgctggaaaacgtcccggcggtggcggaggagttccgctcg
cagtaccgcagcttcgtggtggacgagtaccaggacgtcaccccgctgcagcagcgagtg
ctggacgcctggctgggcgagcgcgacgatctcacggtggttggcgacgccaaccagacc
atttactcctttaccggcgcgagcccggacaacctgctgaacttctcgcgcaagtacccg
aacgccacggtgatcaagctgcagcgcgactaccgctcgacgccgcagattaccgaccta
gccaaccgggtcatcggtcaggccagcgggcgggccgccggcacccgcctggagctacag
ggcatgcgcgagcccggcccggagccgcaattccaggactacgagtccgaagaggccgag
gcccaggaagtcgccggcaagatcttgagcctgcttaacgacggcgtgcccgccaaggag
atcgcggtgctctaccgcatcaactcccagtcggagcccttcgagcaggcgctggcggat
gccggggtggtctaccaggtccgcggcggggagggctttttcaaccgcgccgagatccgc
gagggcgtacgcgagctggtgcgcgcgacccgccgcgacgatctgccggccgacccggtg
gccgtggcccgggccgccttcgcgccgctggggctttccgagcgcgagccggatggcgcc
caggcccgggagcgctggcagtctctaagcgccctggtggatctcatccggcacctggtg
gacaaccggcccggcatcgacctgcccggcgtggtcgcccagctgcaggagcgggcccgc
aacaagcagaacccggtcatggagggcgttaccctggccaccttccacgccgccaagggc
ctggagtgggacgcggtcttcttggtggggttgagcgaaaagctgttgccgctcaaccac
gccatcaagtccggcaacgccgaggacatcgaggaagaacgccgcgtgttctacgtcggg
atcacccgtgcccgcgagcatctgctgtgttcctgggcgcgcgcgaagaccaccggagcc
cgcgccagccgggagcgcacccgctttttggacgggatagtccaggaccaggtcgctgac
gcgccgtcgcggcggtcgaggcgccgctcgtcctgccgcgtgtgcgggcgcccgcttgcc
accccggcggagaagtcgctgggccgccacgagttctgcgcctccgatgtcgacgaggag
ctctttgcccgcctgcgggcatggcgcaaggacgtcgcggccgaggcccaggtgccggcg
tacgtgattttctccgacgccacgctgctggccatcgcggagcaactacccacggatgag
gccgccctgctcagtgtgtccggcgtggggccgagcaaaatggaaaaattcggcgcggaa
atcttgagcctggtctctagccacgtggccggataa
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