Corynebacterium confusum: CCONF_04990
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Entry
CCONF_04990 CDS
T09352
Name
(GenBank) hypothetical protein
KO
K03628
transcription termination factor Rho
Organism
ccou
Corynebacterium confusum
Pathway
ccou03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ccou00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CCONF_04990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccou03021
]
CCONF_04990
03019 Messenger RNA biogenesis [BR:
ccou03019
]
CCONF_04990
Transcription machinery [BR:
ccou03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
CCONF_04990
Messenger RNA biogenesis [BR:
ccou03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CCONF_04990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Rho_N
Spore_III_AA
AAA_25
S1CSD-TOTE-2
AAA_22
Motif
Other DBs
NCBI-ProteinID:
WJY89543
LinkDB
All DBs
Position
1071578..1073407
Genome browser
AA seq
609 aa
AA seq
DB search
MSDTENISPQELASLKLPQLREIAAQKGLRGISALRKGALIEAITTGKKPAAAKAAPKSA
DKADKPAKQAQEQAPAAQADEAPQRDARRPQGRDDKQGDGEKNADNNNGNNGNDEPRYES
RAQARRARRNRARRGGRDDHDGNNQDQGRDNRDNRDNQDDSRNGNNHGNNGGNNHRRNNG
DDDERGGRRGRRNRRNRRNRGGGNDNRGGGNDLQIREGDELQAVGGILEVVDNNVAFLRT
TGYRAANSDVFVNQNLVRRLGLRSGDAVTGQVKVAGATHTHGNGRNRRKYNQLVRVDTVN
GMDPEEAKQRPDFAKLTPLYPNQRLRLETDPKVLTTRVIDLIMPIGKGQRALIVSPPKAG
KTTILQNTANAISINNPECYLMVVLVDERPEEVTDMQRSVNGEVIASTFDRPPSEHTSVA
ELAIERAKRLVEQGKDVVVLLDSITRLGRAYNNSSPASGRILSGGVDSNALYPPKRFLGA
ARNIENGGSLTIIATAMVETGSTGDNVIFEEFKGTGNAELKLDRSISERRVFPAVDVNPS
GTRKDELLLVPEELRIMTKLRRILAALDSHQAIDLLIKQLKKTKSNGEFLMGVAQSAPMV
ADKDEEDYK
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgatacggagaatatctcgcctcaagaactggcatccctgaagctgccgcagctg
cgcgaaattgcggcccagaagggcctgcgcggcatcagcgctctccgaaagggcgctctc
atcgaggcaatcaccaccggtaagaagccggccgccgccaaggccgcgccgaagtcggca
gacaaggcggacaagcccgctaagcaggcgcaggaacaagccccggccgcgcaggctgac
gaagccccgcagcgcgacgctcgccgcccgcagggccgcgacgacaagcagggcgacggc
gagaagaacgccgacaacaacaacggcaataatggcaatgacgagccgcgctacgagtcc
cgcgcgcaggcccgccgggcccgtcgcaaccgcgcgcgccggggtgggcgcgacgaccac
gacggcaacaaccaggaccaaggccgcgacaaccgcgataaccgcgacaaccaggatgat
tcccgcaacggcaacaaccacggcaacaacggcggcaacaaccaccgccggaacaacggc
gacgatgacgaacgcggtgggcgccgcgggcgtcgcaaccgccgcaaccgccggaaccgt
ggcggcggcaacgacaaccgcggtggcggcaacgacctgcagattcgcgagggcgatgag
ctgcaggccgtcggcggcatcctcgaggtagtcgacaacaacgtcgccttcctgcgcacc
accggctaccgcgcggcgaactcggacgtcttcgtcaaccagaacctggtccgccgccta
gggctgcgctccggcgacgccgtgaccggacaggtcaaggtcgcgggcgccacgcacacc
cacggcaacggccgcaatcgccgcaagtacaaccagctggtacgggtcgataccgtcaac
gggatggacccggaagaggccaagcagcgcccggactttgccaagctgactccgctgtat
ccgaaccagcggctgcgcctggagaccgacccgaaggtcctgaccacccgtgttatcgac
ctgattatgccgatcggtaagggccagcgcgccctgatcgtctccccgccgaaggccggt
aagacgaccatcctgcagaacaccgccaacgcgatctccatcaacaacccggagtgctac
ctcatggtggtgctcgtcgacgagcgccccgaagaggtcaccgacatgcagcgctcggtc
aacggcgaggtgattgcctccacgttcgaccgcccgccgtcagagcacacctcggtcgcc
gagctggccatcgagcgcgccaagcgcctggtggagcagggcaaggacgtcgtcgtgctg
ctggactccatcacccgcctgggccgcgcgtacaacaactcatccccggcctccgggcgc
atcctgtccggcggtgtcgactctaacgctctctacccgccgaagcgcttcctgggcgcg
gcccgcaacatcgaaaacggcggctcgctgaccattatcgccacggccatggtggaaacc
ggctcgaccggcgacaacgtcatcttcgaggagttcaagggcacgggtaacgccgagctg
aagctggaccgctccatctccgagcgccgcgtcttcccggccgtcgacgtcaacccgtcg
ggtacccgcaaggacgagctactgctcgtgccggaggagctgcgcatcatgaccaagctg
cggcgcatcctcgcggccctggactcccaccaggccatcgacttgcttatcaagcagctg
aagaagaccaagtccaacggcgaattcctcatgggcgtggcgcagtccgcgccgatggtc
gctgacaaggacgaggaggattacaagtaa
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