KEGG   Corynebacterium confusum: CCONF_04990
Entry
CCONF_04990       CDS       T09352                                 
Name
(GenBank) hypothetical protein
  KO
K03628  transcription termination factor Rho
Organism
ccou  Corynebacterium confusum
Pathway
ccou03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ccou00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CCONF_04990
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ccou03021]
    CCONF_04990
   03019 Messenger RNA biogenesis [BR:ccou03019]
    CCONF_04990
Transcription machinery [BR:ccou03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     CCONF_04990
Messenger RNA biogenesis [BR:ccou03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     CCONF_04990
SSDB
Motif
Pfam: ATP-synt_ab Rho_RNA_bind Rho_N Spore_III_AA AAA_25 S1CSD-TOTE-2 AAA_22
Other DBs
NCBI-ProteinID: WJY89543
LinkDB
Position
1071578..1073407
AA seq 609 aa
MSDTENISPQELASLKLPQLREIAAQKGLRGISALRKGALIEAITTGKKPAAAKAAPKSA
DKADKPAKQAQEQAPAAQADEAPQRDARRPQGRDDKQGDGEKNADNNNGNNGNDEPRYES
RAQARRARRNRARRGGRDDHDGNNQDQGRDNRDNRDNQDDSRNGNNHGNNGGNNHRRNNG
DDDERGGRRGRRNRRNRRNRGGGNDNRGGGNDLQIREGDELQAVGGILEVVDNNVAFLRT
TGYRAANSDVFVNQNLVRRLGLRSGDAVTGQVKVAGATHTHGNGRNRRKYNQLVRVDTVN
GMDPEEAKQRPDFAKLTPLYPNQRLRLETDPKVLTTRVIDLIMPIGKGQRALIVSPPKAG
KTTILQNTANAISINNPECYLMVVLVDERPEEVTDMQRSVNGEVIASTFDRPPSEHTSVA
ELAIERAKRLVEQGKDVVVLLDSITRLGRAYNNSSPASGRILSGGVDSNALYPPKRFLGA
ARNIENGGSLTIIATAMVETGSTGDNVIFEEFKGTGNAELKLDRSISERRVFPAVDVNPS
GTRKDELLLVPEELRIMTKLRRILAALDSHQAIDLLIKQLKKTKSNGEFLMGVAQSAPMV
ADKDEEDYK
NT seq 1830 nt   +upstreamnt  +downstreamnt
gtgagcgatacggagaatatctcgcctcaagaactggcatccctgaagctgccgcagctg
cgcgaaattgcggcccagaagggcctgcgcggcatcagcgctctccgaaagggcgctctc
atcgaggcaatcaccaccggtaagaagccggccgccgccaaggccgcgccgaagtcggca
gacaaggcggacaagcccgctaagcaggcgcaggaacaagccccggccgcgcaggctgac
gaagccccgcagcgcgacgctcgccgcccgcagggccgcgacgacaagcagggcgacggc
gagaagaacgccgacaacaacaacggcaataatggcaatgacgagccgcgctacgagtcc
cgcgcgcaggcccgccgggcccgtcgcaaccgcgcgcgccggggtgggcgcgacgaccac
gacggcaacaaccaggaccaaggccgcgacaaccgcgataaccgcgacaaccaggatgat
tcccgcaacggcaacaaccacggcaacaacggcggcaacaaccaccgccggaacaacggc
gacgatgacgaacgcggtgggcgccgcgggcgtcgcaaccgccgcaaccgccggaaccgt
ggcggcggcaacgacaaccgcggtggcggcaacgacctgcagattcgcgagggcgatgag
ctgcaggccgtcggcggcatcctcgaggtagtcgacaacaacgtcgccttcctgcgcacc
accggctaccgcgcggcgaactcggacgtcttcgtcaaccagaacctggtccgccgccta
gggctgcgctccggcgacgccgtgaccggacaggtcaaggtcgcgggcgccacgcacacc
cacggcaacggccgcaatcgccgcaagtacaaccagctggtacgggtcgataccgtcaac
gggatggacccggaagaggccaagcagcgcccggactttgccaagctgactccgctgtat
ccgaaccagcggctgcgcctggagaccgacccgaaggtcctgaccacccgtgttatcgac
ctgattatgccgatcggtaagggccagcgcgccctgatcgtctccccgccgaaggccggt
aagacgaccatcctgcagaacaccgccaacgcgatctccatcaacaacccggagtgctac
ctcatggtggtgctcgtcgacgagcgccccgaagaggtcaccgacatgcagcgctcggtc
aacggcgaggtgattgcctccacgttcgaccgcccgccgtcagagcacacctcggtcgcc
gagctggccatcgagcgcgccaagcgcctggtggagcagggcaaggacgtcgtcgtgctg
ctggactccatcacccgcctgggccgcgcgtacaacaactcatccccggcctccgggcgc
atcctgtccggcggtgtcgactctaacgctctctacccgccgaagcgcttcctgggcgcg
gcccgcaacatcgaaaacggcggctcgctgaccattatcgccacggccatggtggaaacc
ggctcgaccggcgacaacgtcatcttcgaggagttcaagggcacgggtaacgccgagctg
aagctggaccgctccatctccgagcgccgcgtcttcccggccgtcgacgtcaacccgtcg
ggtacccgcaaggacgagctactgctcgtgccggaggagctgcgcatcatgaccaagctg
cggcgcatcctcgcggccctggactcccaccaggccatcgacttgcttatcaagcagctg
aagaagaccaagtccaacggcgaattcctcatgggcgtggcgcagtccgcgccgatggtc
gctgacaaggacgaggaggattacaagtaa

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