Corynebacterium confusum: CCONF_05515
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Entry
CCONF_05515 CDS
T09352
Symbol
polA2
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
ccou
Corynebacterium confusum
Pathway
ccou03030
DNA replication
ccou03410
Base excision repair
ccou03420
Nucleotide excision repair
ccou03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ccou00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CCONF_05515 (polA2)
03410 Base excision repair
CCONF_05515 (polA2)
03420 Nucleotide excision repair
CCONF_05515 (polA2)
03440 Homologous recombination
CCONF_05515 (polA2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ccou03032
]
CCONF_05515 (polA2)
03400 DNA repair and recombination proteins [BR:
ccou03400
]
CCONF_05515 (polA2)
Enzymes [BR:
ccou01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CCONF_05515 (polA2)
DNA replication proteins [BR:
ccou03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
CCONF_05515 (polA2)
DNA repair and recombination proteins [BR:
ccou03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
CCONF_05515 (polA2)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CCONF_05515 (polA2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
HHH_2
Motif
Other DBs
NCBI-ProteinID:
WJY89641
LinkDB
All DBs
Position
1181925..1184531
Genome browser
AA seq
868 aa
AA seq
DB search
MAFRAFYALPAENFSTSGGQHTNAVYGFLSMLSSIVSEERPDKMAVAFDVGRKTFRTEKF
PEYKAQREAAPEEFKGQVDIIREVLTTLGITTLSRENFEADDILATLATEATAAQDFDTY
IVTGDRDYLQLVNESTTVLYPMRGVSNLHRFTPEAVEEKYGLTPRQYPDFAALRGDPSDN
LPGIPKVGEKTATKWITQYGSLDELVAHADDIKGVAGQNFRDRLEQVQLNRELTQMITDM
DLEVGPGDLDFRGAVVSEVADHFDDLEFGTNLRDRVLKAIPNDGGEAASQDEDVQVPEVN
IVSEKLADWLPGRGHVAVFVQGDGRPGQGDAAAMAFVDTDYHGLQVELAELDAADDKSLA
EWLADADCPKYLHEAKAAYHMVLGRGIELAGIAHDTAVAAYLLRPGQRTYELTDVYQRHL
HKTLGAASDQLSLLDETSLVDSAAAIMELAAELTRQLHDIDSFQLYTDLELPLISILARM
EATGIAVDIDTLDAQLEAFVAQVKEQEEAARELAGDPSLNLNSPKQLQAVLFDTFDLPKT
KKTKTGYSTAAKEIEALAVNHPHPFLDHLLAHREYQKLKSTLEGLIKTVQPDGRIHTTFN
QTVASTGRLSSADPNLQNIPVRTPAGRKIRSGFVVGEGFETLLTADYSQIEMRVMAHLSQ
DPGLIEAYQAGEDLHNYVGSKVFDVPVDQVTSELRRRVKAMSYGLVYGLSAFGLSQQLGI
SPKEAKEIMESYFERFGGVKTYLDEVVDTARKDGYTSTIFGRRRYLPELASDNRLARENA
ERAALNAPIQGTAADIIKVAMIRVDAALKEKKSRVLLQVHDELVVEIAPGELNEVRAILE
KEMDSAINLRVPLEVSAGAGANWDAAAH
NT seq
2607 nt
NT seq
+upstream
nt +downstream
nt
atggccttccgcgctttctacgcgctgccggcggaaaatttctccacctcgggtggccag
cacaccaatgcggtctatgggttcttgtcgatgctgtcgagcatcgtgagcgaggaacgc
cccgacaagatggccgtggctttcgacgtggggcgcaagaccttccggaccgagaagttt
ccggagtataaggcccagcgcgaggcggcgccggaggaattcaagggccaggtggacatc
atccgcgaggtgctgaccaccctgggcattacgacgctgtcgcgggagaacttcgaggcc
gacgacatcctggcgaccctggcgaccgaggctacggcggcgcaggacttcgatacctat
atcgtcaccggcgaccgcgactacctgcagctggtcaacgagtccacgacggtgctctat
cccatgcgcggggtgagcaacctgcaccggttcaccccggaggccgtggaggagaaatac
ggtctgaccccgcggcagtacccggatttcgcggcgctgcgcggcgatccgtccgataac
ctgcccggcatcccgaaggtcggggagaagacggcgaccaagtggattacccagtacggc
agcctcgacgagctggtcgcgcacgccgatgatattaagggcgtggccggccagaacttt
agggatcgcctggagcaggtccagctcaaccgcgagttgacccagatgattacggacatg
gacttagaggtcggcccgggcgacctggactttaggggcgcggtcgtcagcgaggtcgca
gatcacttcgacgatctcgaattcggcaccaacctgcgcgatcgtgtccttaaggccatc
ccgaacgacggcggtgaggccgcctcgcaggacgaggatgtgcaggtgccggaagtgaac
atcgttagtgaaaagctggcggactggctgccggggcgcgggcacgtggccgtcttcgtc
cagggcgacggacggcccgggcagggcgatgccgccgccatggccttcgtcgacaccgac
taccacggcctgcaggtcgagctggccgaactcgacgcggccgacgacaaatcgctggcc
gaatggcttgccgatgccgactgccccaagtacctgcacgaggccaaggctgcctaccac
atggtgttgggccgcggcattgagctggcgggcatcgcccacgacaccgcggtggcggcc
tacctgctgcgcccgggccagcgcacctacgagctgacggacgtctaccagcgccacctg
cacaagaccctgggtgcggccagcgaccagctgagcctgctagatgagacctccctggtg
gattcggcggccgcgatcatggagctcgccgcggagctgacccggcagctgcacgacatc
gactccttccagctgtacacggacctggagctgccgctgatttccatcctggcgcggatg
gaggccaccggcatcgccgtcgatatcgacacgctggacgcccagctggaggccttcgtc
gcccaggtcaaggagcaggaggaggccgcgcgcgagctggccggcgacccctcgctgaac
ctgaactcgccgaagcagctgcaggcggtgctcttcgacaccttcgacctgccgaagacg
aagaagaccaagaccggctattccaccgcggccaaggagatcgaggccctagcggtgaac
cacccgcacccgttcctggaccacctgctggcccaccgcgagtaccagaagctcaagtcc
acgctggaggggctcatcaagacggtccagccggacgggcgcatccacaccaccttcaac
cagacggtggcctcgacgggccggttgtcctcggcggatccgaacctgcagaacatcccg
gtgcgcaccccggccgggcgcaagatccgctcgggcttcgtggtgggtgagggcttcgag
accctactgaccgcggactactcccagattgagatgcgcgtgatggcccacctgtcccag
gacccggggctcatcgaggcctaccaggcgggcgaggacctgcacaactacgtcggctcc
aaggttttcgatgtcccggtcgaccaggtcacctccgagctgcgccgccgcgtcaaggcc
atgtcttacggcctggtctatggcctgtccgccttcgggctgtcccagcagctgggcatt
agcccgaaggaggccaaggagatcatggaaagctacttcgagcgcttcggcggggtaaag
acctacctggacgaggtagtcgataccgcccgcaaggacggctatacctcgaccatcttc
gggcgccgccgctacctgccggagctggccagcgacaaccggctggcccgcgagaacgcc
gagcgcgccgccctcaacgcccccatccagggcaccgcggccgatatcatcaaggttgcg
atgatccgagtcgatgccgcgctcaaggaaaagaagtcccgcgtgctgctgcaggtccac
gacgaattggtggtcgaaatcgcccctggcgaactcaacgaggtccgcgccatcctggaa
aaggagatggattcggccatcaacctgcgcgtgccgctggaggtctccgccggcgccggc
gccaattgggacgccgcggcgcactag
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