Corynebacterium confusum: CCONF_06400
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Entry
CCONF_06400 CDS
T09352
Symbol
priA
Name
(GenBank) Primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
ccou
Corynebacterium confusum
Pathway
ccou03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ccou00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CCONF_06400 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccou03400
]
CCONF_06400 (priA)
Enzymes [BR:
ccou01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CCONF_06400 (priA)
DNA repair and recombination proteins [BR:
ccou03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CCONF_06400 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
C1_1
DZR
Motif
Other DBs
NCBI-ProteinID:
WJY89809
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All DBs
Position
complement(1378126..1380159)
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AA seq
677 aa
AA seq
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MPPKTPAATKPVARVLPLLGISHLDRGFDYYVSEADSAAAQPGVRVRIRFAGRLCDALVL
SREPSPEFSGELRFIERVISGFVVYPPQLAALVKSLADRYGGVRSDIIRSALPPRHAKAE
EADFSTPWEELGSTTEPDLSDWAGYVHGQSFVDYVLSGNPARAAWQMAPGNEWHRPLAAL
SAKVAIDGGAVLLVVPTQRQLDELEHSLRDYVSAKQITVLSNSLGPQARYRRFLSAAQGQ
ARIVLGTRSAAFAPVKGLRLAVVVDDGNDNLVDNVKPYAHTREVLSTRAAQESASLIVAG
FSRTAEAQLLVESGWMHDLVPDPATLRARMPAVLPVGTYGIDLSRNTEGGTTRLQGPAYQ
AMARALDRGEPVLVQSPRAGYMPILACGNCRAPARCRHCNGPIGLPPEEGSGRSGQPSAP
TCRWCGKIAAHHRCSECGSPRLRAIVLGQERTAEEFGRAFPSVRVKVSGGNRVIEEIEHA
PQLVVATPGAEPPVRGGAYGAVILMDAGALLNRQDLRAGEDTLAKWARAARLAAPAGQGG
EVIVAADPDLPLVQYLAEWDFAAAAHAELLSRREVRFPPAVHMAAIDGPDAALDGFLELA
ELPANAEILGPVPLPPGLKLPGDYDEQRLGAPQRVLVRTPLGPRSELGRALRQANAARTS
RKDDAPLRIQVDPIHIG
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atgcctcccaagacacccgctgccaccaaaccggtggcgcgggtgttgcctttattgggc
atctcccacttggaccgcggcttcgactactacgttagcgaggccgactcggcggccgcg
cagcccggggtgcgcgtgcgcatccgcttcgccggccgcctgtgcgacgccctcgtgctc
agccgcgagccgagcccggagtttagcggcgagctgcgctttatcgaacgggtcatctcg
ggtttcgtggtctacccgccgcagctggccgcgctggtcaaatccctcgccgaccgctac
ggcggggtgcgctctgacatcatccgctcggccctgccgccgcggcacgccaaggccgaa
gaggcggacttctccacgccctgggaggagctcggttcgaccacggaaccggacctgtcc
gactgggccggctatgtccacgggcagtccttcgttgactacgtcttaagcggcaacccc
gcccgcgctgcctggcagatggcccccggtaacgagtggcaccgcccgctggcggccttg
agtgccaaggtcgccatcgacggcggggccgtgctgctggtcgtgcccacccagcgccag
ctcgacgagctggagcacagcctgcgcgactacgtctccgccaagcagatcaccgtgctg
tccaacagcctgggcccgcaggcgcgctaccggcgcttcctttccgcggctcaggggcaa
gcccggatcgtgctgggcacccgttcagctgccttcgccccggtgaaggggctgcgcctg
gcagtcgtggtcgacgatggcaacgacaacctggtcgataacgtcaagccctacgcccac
acccgcgaggtcttaagcacccgcgccgcccaggaatccgcctccctcattgtcgccggg
ttttcccgcaccgcggaggcccagctgctggtcgagtccggctggatgcacgatctcgtg
ccggatccggccaccctgcgcgcccggatgccggcggtgctgcccgtcggcacctacggc
atcgacctatcccgcaacacggagggcgggaccacccggctgcagggcccggcctatcag
gcgatggcccgcgcgctggaccgcggagagcccgtcctggtgcagtccccgcgggccggc
tacatgccgattctagcctgtgggaattgccgcgcgccggcccgctgccggcattgcaac
gggcccattggcctgccgccggaggagggctctggcaggtcggggcagccctccgctccg
acctgccggtggtgcggtaaaatcgccgcgcatcaccgctgcagcgaatgcggttcgccc
cggctgcgcgccatcgtgctggggcaggagcgcaccgccgaggaattcggccgcgccttc
ccctcggtacgcgtcaaggtctccggcggcaaccgcgtcatcgaggagatcgaacacgcc
ccgcagctggtggtcgcgacccccggggcggagccacccgtgcgtggcggcgcttatggg
gcggtcatcttgatggacgcgggcgcgctgctcaaccgccaggacctgcgcgccggcgag
gataccttggccaagtgggcccgggccgcccgcctggccgccccggccggccaaggcgga
gaggtcatcgtcgccgccgacccggacctgcccctggtgcagtacctggccgagtgggac
ttcgcggccgctgcccacgcggagctgttgagccggcgcgaggtccgcttcccgccggcg
gtgcacatggccgctatcgacggcccggacgccgccctggacggcttcctggagctagcg
gagctgcccgcgaacgcggagatcctcggcccggttccgctgccgccggggctgaaactg
cccggcgactacgatgaacagcgcctgggcgcgccgcagcgggtcctcgtgcgcacgccg
ttggggccgcgctccgagctcggccgcgccttgcggcaggcgaacgcggcgcgcacctcc
cgtaaggatgacgcgcccctgcggattcaggtagatccgatccatatcggctaa
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