Corynebacterium confusum: CCONF_07170
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Entry
CCONF_07170 CDS
T09352
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ccou
Corynebacterium confusum
Brite
KEGG Orthology (KO) [BR:
ccou00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ccou03016
]
CCONF_07170 (truB)
Enzymes [BR:
ccou01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
CCONF_07170 (truB)
Transfer RNA biogenesis [BR:
ccou03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CCONF_07170 (truB)
Prokaryotic type
CCONF_07170 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
DKCLD
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
WJY89956
LinkDB
All DBs
Position
1540660..1541583
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AA seq
307 aa
AA seq
DB search
MAAHALDSKAMTDPLASSGLVIVDKPAGMTSHDVVARLRRYFGTRKVGHAGTLDPMATGV
LIVGLERGTKFLAHLVAATKAYEATICLGAATTTDDAEGEITSRGATEAIDDARIHAAIQ
DLRGDIMQRPASVSAIKIAGKRAHERVRDGEDVDIPARPVTVRSFEVHSITRTDGWIDIE
CSVECSSGTYIRSLARDLGEALGCGGHLTALRRTAVGNFRLSDSAPLAELEDSPRLSLSL
DEALTRCYPVLEVTADEQAALAMGQWLEPRGLEGTHAAVGPDGRAVALVKEKGKRLATVF
VARPSTL
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atggccgcccatgccctagactcgaaggccatgacggatcctctcgctagctctggactg
gtaattgtggacaagcccgcgggcatgacctcacacgatgtcgtggcccggctgcgccgc
tacttcggcacccgcaaggtcggtcacgccggcaccctcgacccgatggccaccggcgtg
ctcatcgtcgggctggagcgcggcacgaaattcctggcccacctcgtcgcggctaccaag
gcctatgaggccaccatctgcttgggcgcggcgaccaccaccgacgacgccgagggcgaa
atcacctcgcgcggggccaccgaggcaatcgacgatgcccgcatccacgccgccatccag
gatctgcgcggcgatatcatgcagcggccggctagcgtctccgccatcaagatcgccggc
aagcgcgcccacgagcgcgtgcgcgacggcgaggacgtggacatccccgcccgcccggtg
accgtccgctccttcgaggtgcactccattacccgcaccgacggctggatcgatatcgag
tgcagcgtggagtgttcctccggcacctatatccgctccctggcccgagacctgggcgaa
gcgctgggctgcggcgggcacctgacggccctgcggcgcacggccgtgggaaatttccgc
ctgtctgattccgctcccttggccgagctagaggattctcctcgcctttctctctccctc
gacgaggcgctcacccgctgctaccccgtcctggaggtcaccgccgacgagcaggccgcg
cttgccatgggacagtggcttgaaccccgcggactggagggcacgcacgccgccgtcggc
cccgacgggcgcgccgtcgccctagtcaaggagaagggcaagcgcctagccaccgtcttc
gtggcgcgcccgtccacgctctag
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