Corynebacterium confusum: CCONF_07735
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Entry
CCONF_07735 CDS
T09352
Symbol
dnaE2
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
ccou
Corynebacterium confusum
Pathway
ccou03030
DNA replication
ccou03430
Mismatch repair
ccou03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ccou00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CCONF_07735 (dnaE2)
03430 Mismatch repair
CCONF_07735 (dnaE2)
03440 Homologous recombination
CCONF_07735 (dnaE2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ccou03032
]
CCONF_07735 (dnaE2)
03400 DNA repair and recombination proteins [BR:
ccou03400
]
CCONF_07735 (dnaE2)
Enzymes [BR:
ccou01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CCONF_07735 (dnaE2)
DNA replication proteins [BR:
ccou03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CCONF_07735 (dnaE2)
DNA repair and recombination proteins [BR:
ccou03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CCONF_07735 (dnaE2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
WJY90069
LinkDB
All DBs
Position
complement(1658280..1661849)
Genome browser
AA seq
1189 aa
AA seq
DB search
MVKNSSFVHLHNHTEFSMLDGMAKVDLLAEEVNRQQMPAVGMTDHGNMFGSDAFYRRMTG
AGIKPIIGIEAYMAPGSRFNKKRQLWGNPDQKRDDVSASGAYLHQTMLAENATGLQNLFK
LSSLASYEGQLGKWPRMDAELIAEHADGIIATTGCPSGDVQTRLRLGQFDEALEAAAMWQ
DIYGKDNYFLELMDHGLDIEKRTRDALLEIGRRLDLPPLVTNDCHYVLESQAPNHEAMLC
VQTGKTLNDPDRFKFGGSGYYIKSAQQMREIWDEMVPDGCDNTLWIAERVGDYSKVWEEH
THDRMPIADVPEGHSPTSWLTHEVMEGLKARFPDSEVPDDYIKRAEYEISVIDMKGYPSY
FLIVAELIKHARSVGIRVGPGRGSAAGALVAYALTITNIDPLEHDLLFERFLNPERPSAP
DIDIDFDDRRRGEMITYAAERWGEDKIAQVITFGTVKTKQAIKDSAKVHFGQEGFQMADR
INAALPPAIMAKDIPLAGITDPEHERYSEAAEVRNMVESDPTVRQIYDTARGLEGVVRQA
GVHACAVIMASVRLMDHIPMWKRPADGAIITGWDYPACEAIGLLKMDFLGLRNLTVIGDA
LENIRKNRGEEIHLEDLHADDPAVSRVYELLSRGETLGVFQLDSGGMQELLKRMKPTGFK
DIVASLALYRPGPMGVNAHWDYADRKNGRKEITPIHPELAEPLKEILDETYGLIVYQEQI
MRISQKVANYTAGEADGFRKAMGKKKPEVLAQQYEKFSGGMFDNGYSKDAVDALWGTIEP
FASYAFNKSHAAGYGLVSFWTAYLKAYYAPEYMAALLTSVGDKKDKSAIYLSDCRHLGIK
VLPPDVNESDVDFQAVGEDIRFGMGAIRNVGADVVESLISTRRAKGAFTSFSDYLDKIEL
AACSKRVTESLIKAGAFDSLGHPRKGLMLIQEDAVDSVQTTKKAADKGQFDLFAGFGGDD
SETANAFTIEVPDEHWERKHELALEREMLGLYVSGHPLDGFEEALDAQTDTPLPKILAGE
VRDKQELLIGGIISGVDRRFSKKDGSPWAIVTVEDHHGAQVEILVFNKVYSLVAPQIVED
NIILAKVQVKIRDERMSLFCNDIRVPDLGPGNGAGLPLRLTMRTDQCTMDNIAKLKQVLT
NNRGESDVYLTLTCGDESTMMILGEDLRVERSGNLMGDLKATMGAGILG
NT seq
3570 nt
NT seq
+upstream
nt +downstream
nt
atggtcaaaaactcctccttcgtccatctgcataaccacaccgagttttccatgctggac
ggcatggccaaggtggatctgctggcagaggaggttaaccggcagcagatgccggcggtg
ggcatgaccgaccacggcaacatgttcggctccgacgccttctaccgccgcatgacgggg
gcgggaatcaagccgatcatcggcatcgaggcctacatggcgcccggctcccgcttcaac
aagaagcgccagctgtggggcaacccggaccagaagcgcgacgacgtctccgcctccggc
gcgtacctccaccagaccatgctggcggaaaacgccaccggcctgcagaacctgttcaag
ctgtcgtcgctggcctcctacgagggccagctgggcaagtggccgcgcatggacgccgag
ctcatcgccgagcacgccgacggaatcattgccaccactggctgcccctcgggcgacgtg
cagacgcgcctgcgcctgggccagttcgatgaggccctggaagccgccgcgatgtggcag
gacatctacggcaaggacaactacttcctggagttgatggaccacgggctcgacatcgaa
aagcgcacccgcgacgccctgctagaaatcggccgccgcctcgacctgccgccgctagtg
accaacgactgccactacgtgctggagtctcaggcccccaaccacgaggccatgctgtgc
gtgcagaccggcaagacgcttaacgacccggaccgcttcaagttcggcggctcgggctac
tacatcaagtccgcgcagcagatgcgcgagatctgggacgagatggtcccggacggctgc
gacaacaccctgtggatcgccgagcgcgtcggggactacagcaaggtctgggaggagcac
acccacgaccgcatgccgatcgcggacgtgccggaggggcacagcccgacctcctggctg
acccacgaggtcatggaggggctcaaggcgcgcttccccgactcggaggtgccggacgac
tacatcaagcgcgccgagtacgagatctcggtcatcgatatgaagggctacccgtcctac
ttcctcatcgtggctgagctcatcaagcacgcccgctcggtgggcatccgcgtcgggccg
ggccgtggttctgccgccggcgccctggtcgcctacgcgctgaccattaccaatatcgac
cccctcgagcacgacctgctcttcgagcgcttcctcaacccggagcgcccgtccgcaccc
gatatcgatatcgactttgacgaccgccgccgcggcgagatgatcacctacgccgctgag
cgctggggcgaggacaagatcgcccaggtgatcaccttcggtacggtcaagaccaagcag
gccatcaaggactccgcgaaggtgcacttcgggcaggagggcttccagatggccgaccgc
atcaacgccgccctcccgccggccatcatggccaaggacattccgctggctggcatcacg
gacccggagcacgagcgctactccgaggccgccgaggtgcgcaacatggtcgaatccgac
ccgaccgtccgccagatttacgacaccgcccgcggcctggagggcgtggtccgccaggcc
ggcgtccacgcctgcgcggtgatcatggcctcggtgcggctgatggaccacatcccgatg
tggaagcggccggccgacggcgccatcatcaccggctgggactacccggcctgcgaggcc
atcggcctgctgaagatggacttcctgggcctgcgtaacctcaccgtcatcggcgacgcc
ctggaaaacatccgcaaaaaccgcggcgaggagatccacttggaggacctgcacgccgac
gacccggccgtcagccgcgtctacgaactgctctcccgcggcgagaccctcggcgtgttc
cagctggactccggcggcatgcaggagctgctcaagcgcatgaagccgacgggtttcaaa
gacatcgtggcatcgctggcgctctaccgcccgggcccgatgggtgtcaacgcccactgg
gactacgccgaccgtaagaacgggcgcaaggaaatcaccccgatccaccccgagctggcc
gaaccgctgaaggaaatcctggacgagacctacggcctcatcgtctaccaggagcagatc
atgcgtatctcccagaaggtagccaactacacggccggcgaggcagacggcttccgcaag
gccatgggtaagaagaagcccgaagtactcgcccagcagtacgagaagttctcgggcggt
atgttcgacaacggctactccaaggacgccgtcgatgccctctggggcaccatcgagccc
ttcgcgtcctacgcgttcaacaagtcccacgccgccggctacgggctggtctccttctgg
accgcctacctgaaggcctactacgcgccggaatacatggcggcgctgctgacctcggtc
ggcgacaagaaggacaagtccgccatctacctgtccgactgccgccacctgggcatcaag
gtgctgccgccggacgtcaacgagtccgacgtcgacttccaggccgtcggcgaggacatc
cgcttcggcatgggcgccatccgcaatgtcggcgcggacgtggtggagtctttgatttcc
acccgccgcgcgaagggcgcatttaccagcttctccgactacctcgacaagattgagcta
gccgcgtgctccaagcgcgtgaccgagtcgctcatcaaggccggtgcctttgactccctg
ggccatccccgcaagggcctgatgctcatccaggaggacgcggtggactcggtacagacc
accaagaaggccgcggacaagggccagttcgacctgttcgcgggcttcggtggcgacgac
tccgagaccgccaacgcttttaccatcgaggtccccgacgagcactgggagcgcaagcac
gagctggcgctggagcgcgagatgctgggcctgtacgtctccggccaccccctggacggc
ttcgaggaggccctcgacgcgcagaccgacaccccgctgcccaagatcctggccggcgag
gtccgcgacaagcaggagctgctcatcggcggcatcatctcgggcgtggaccggcgcttt
tccaagaaggacggctcgccctgggccatcgtcacggtggaggaccaccacggcgcccag
gtggaaatcctggtcttcaacaaggtctactccctggtcgcgccgcagatcgtggaggac
aacatcatcctggccaaggtccaggtcaagatccgggatgagcgcatgtccctgttctgc
aacgacatccgcgtgcctgatctcggccccggcaacggcgccggcctgccgctgcggctg
acgatgcgcaccgaccagtgcaccatggacaacatcgccaagctcaagcaggtgctgacc
aacaaccgcggcgagtccgacgtctacctgaccctgacgtgtggcgacgaatccaccatg
atgatcctgggcgaggatctgcgggtggagcgctccggcaacctgatgggggatttgaag
gcgacgatgggcgcgggcatcctcggctag
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