KEGG   Corynebacterium coyleae: CCOY_03915
Entry
CCOY_03915        CDS       T09177                                 
Name
(GenBank) putative ATP-dependent helicase Lhr
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
ccoy  Corynebacterium coyleae
Brite
KEGG Orthology (KO) [BR:ccoy00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ccoy03400]
    CCOY_03915
Enzymes [BR:ccoy01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     CCOY_03915
    5.6.2.6  RNA 3'-5' helicase
     CCOY_03915
DNA repair and recombination proteins [BR:ccoy03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    CCOY_03915
SSDB
Motif
Pfam: DEAD_assoc WH_Lhr DEAD WH4_Lhr WH3_Lhr Helicase_C ResIII WH2_Lhr DUF6406 PhoH Cas3-like_C_2
Other DBs
NCBI-ProteinID: WJY79398
LinkDB
Position
796387..801057
AA seq 1556 aa
MTASILDRFHPQVAGWFQDVFAAPTAVQEQAWRAISDDENALVVAPTGSGKTLAAFLWAL
NSLVERAGQQALPIDGANTSTHGGVRVLYISPLKALGVDVENNLRAPLAGIARVAQRLGR
DMPDISVGVRSGDTPQAERNRQVRKPPDILITTPESLYLMLTSKAAGMLKTVDTVIVDEI
HALAGTKRGVHLALSLERLRRLAGDFQRIGLSATVRPIEAVANFLGPKTTIINPPGEKRW
QLDVRVPVDDMSDLPVPEDASTIGDAVFDNALDDALDAPPPGATNSIWPHIERAIYDEVM
AHRSTIVFVNSRRTAERLTSQLNELWAKEHDPEALSPQTRRPPAQLMKSVDTAGHAATVI
ARAHHGSVSKDERAQTETMLKEGTLRAVVSTSSLELGIDMGAVDLVIQVESPPSVASGLQ
RVGRAGHTVGAVSEGTFYPKHRSDLVQTAVTVPRMRQGLIEELHTPRSPLDVLAQQTVAA
VAVEDLDVDEWYDTVRRAWPYRDLAREVFDSVIDLVIGVYPSTDFAELRPRAILEGTVLK
ARPGAQRVAVTNAGTIPDRGMFGVFLLAGSQEGDKAPRRVGELDEEMVYESRVGDVFTLG
ASSWRIENITRDQVQVSPAPGHTGRLPFWTGDGLGRPYELGKAVGAFRREAKSALDESLD
ERARTNLLQYLDEQEEATGILPDEKTLVLERFTDELGDWRVVLHTPFGKGVNAAWALATG
WRVAQETGMDAQAVAGDDGIVLRLPQGEGEPDGAIFQFDADEIADIVTEQVGNSALFASR
FRECAARALLLPRRNPGKRAPLWQQRQRAEQLLDVARNYPSFPIILETVRECLQDVYDLP
ALQEVMRDINTRRVRIAEVTTDQPSPFASSLLFNYTGAFMYEGDTPLAEKRAAALSLDPS
LLAKLLGTVELRELLDADIIAEVDASLRRVGRAETSEQFADTLRIVGPVPIDDLPTYTSV
PLTSLEQSLGARMMLVRIGGREHVAQVLDAPLLRDGLGVPVPPGVPAQVQTIPDALAQLV
GRWVRTRGPFVLRDLADAFGLAVGAAHAALMPLVDKEKVIEGRYRQGVEEQEYVAAEVLR
IIRSRSLAAARAQTRPVSQSAYGRFLPSWSNVAPVGVTPALRGADGVYSVIEQLAGVRLP
ASAWESHIFPSRVGDYSPVMLDELTANGEVAIVGAGKAGARDPWIMLLPADYAAQLMPQV
EEPLLSLTQSQVMEKVRRGGGFLFGDLLEPSTTTEELREAMWDLVEAGFLAPDSFAPIRA
RLAGGKTAHRARRRPQRSRVRSGRTSFASTVPPDMVGRWSLTPTPDSDPTRRSVALGESL
LDRYGVVTRGSVVAEDILGGFALAYKTLSGFEESGKAMRGYLVEGLGASQFSTPATIDRL
RGHQDTDDVVGWPSGARDPQVHVLAATDPSNPYGAALPWPAQGPTRAAGAMVVLVDGLLA
AHITRGGRTMTTFFDFFPDGVGDPMPLVVDALTQAVRAGRMQPLSVEKLNGGPAFSLKDF
GATVTHKGAKIGGRASAPPKRRGRSITEALGELDGAGEADGRPDLGGPADGLTFDD
NT seq 4671 nt   +upstreamnt  +downstreamnt
atgactgcctcgatcttggaccgctttcacccgcaggtggcggggtggttccaggacgtc
ttcgcagcacccaccgcggtgcaggagcaggcgtggcgcgcgatttccgacgacgagaac
gccctcgtcgtcgcaccgaccggctccggcaagacgctggcggcattcttgtgggcgctg
aactccctggtggagcgggccggccagcaggcgctgcccatcgatggggcgaacacctcc
acccacggcggcgtgcgcgtcctttatatttcgccgctgaaggccctcggcgtggatgtg
gagaacaacctccgcgcacccctggctggcattgcgcgggtggcgcagcgtttgggccgc
gacatgccggacatttcggtgggggtgcgctcgggtgacaccccgcaggcggagcgcaac
cggcaggtgcgaaagccgccggacattttgatcaccacgccggagtcgctgtatctcatg
ctcacgtccaaggcggcgggcatgttgaagacggtggatacggtcattgtcgacgagatc
cacgccctcgccggcaccaaacgcggcgtgcacctcgcgctctcgctggagcgcctgcgc
cgcctcgccggggacttccagcgcatcggtttgtccgccacggtgcgcccgatcgaggcg
gtggccaactttttgggccccaagacgacgattatcaacccgccgggggagaagcgctgg
cagttagacgtgcgtgtgcctgtcgatgacatgagcgacctgcccgttcccgaggacgcc
tccaccatcggcgatgctgttttcgacaatgccctggacgacgccctagacgccccgccg
cctggggccaccaactccatctggccccacatcgagcgcgcgatttacgacgaagtcatg
gcccaccggtccaccatcgtcttcgtcaactcccgccgcaccgcggaacgcctgaccagc
cagttaaacgaactctgggcgaaggaacacgacccggaggcgctgtccccgcagacccgc
cgcccgccggcgcagctgatgaagtcggtggataccgccggccacgccgcgaccgtgatc
gcgcgcgcccaccacggcagcgtgtccaaggacgagcgcgcccagaccgaaaccatgctg
aaagagggcaccctgcgcgcggtggtgtccacctcctcgctggagctgggcatcgacatg
ggtgcggtcgacctggtcatccaggtggaatccccgccgtcggtggcctccggcctgcag
cgcgtgggccgcgccgggcacaccgtgggggcggtctccgagggcacgttctacccgaag
caccgctccgacctggtgcaaaccgcggtgacggtgcctaggatgcgccagggcctcatc
gaggagctgcacaccccgcgaagccccttggacgtgctcgcgcagcagaccgtggcggcg
gtcgcggtggaggacctggatgtggacgagtggtacgacaccgtgcgccgcgcctggccg
taccgtgacctcgcacgcgaggtgttcgactcagtgatcgacctggtcatcggcgtctac
ccgtccaccgacttcgccgagctgcggccccgcgccatcctcgagggcactgtcttgaag
gcacgccccggcgcccagcgggtcgcggtgaccaacgcgggcaccatccccgatcgcggc
atgttcggcgtgttcttgctcgcaggctcgcaagaaggggacaaagcaccccgccgcgtc
ggcgagttggacgaggagatggtctacgagtcccgcgtcggcgacgtgtttaccctcggc
gcgtcgtcgtggcgcatcgaaaacatcacccgcgaccaggtgcaggtcagcccggcgccc
ggacacaccggacgcctgccgttctggactggcgacgggctgggcaggccctacgagcta
ggtaaggcggtgggggcgtttcgtcgagaagcaaaaagtgctttggacgaaagcttggac
gagcgcgcgcgtaccaatctgctgcaataccttgacgagcaggaggaagccaccggcatc
ctgcccgacgagaaaacactcgtgctggagcgcttcaccgacgagttaggcgactggcgc
gtggtgctgcacacccccttcggcaagggcgtgaacgcggcgtgggcgctggccaccggc
tggcgggtcgcccaggaaaccgggatggacgcccaggcggtggcgggcgacgacggcatc
gtgctgcgcctgccgcaaggggagggggagcccgacggggcgatcttccaattcgacgcc
gacgagatcgcggacatcgtcaccgaacaagtgggtaactccgccctgttcgcctcccgg
ttccgcgagtgcgccgcccgcgccctgctgctgccgcgccgcaaccccggcaagcgtgca
cccctgtggcagcagcgccagcgcgccgagcagctgttggatgtggcccggaattacccg
tcgtttccgatcatcctggaaacggtgcgcgagtgcctccaggacgtctacgacctaccc
gccctgcaggaggtgatgcgcgacatcaatacccgccgggtgcgcatcgccgaggtgacc
accgaccagccgagcccgttcgcctcctcgctgctgttcaactacaccggcgcgttcatg
tacgagggcgacaccccgctggccgagaagcgggccgcggcgctgtccttggacccgtcc
ctgctggccaaattgctgggcaccgtcgagctgcgcgaactgctcgacgcggacatcatc
gcggaggtcgacgcctcgctgcgccgggtgggccgcgcggaaacttccgagcagttcgcc
gacaccctgcgcatcgtggggcccgtgcctatcgacgacctgcccacctacacctcggtt
cccctgacctccctggagcagtccctgggggcacgcatgatgctggtgcgcatcggcggg
cgcgagcacgtcgcccaggtgctggacgcgcccttgcttcgcgacggcctcggcgtgccc
gtcccgcccggcgtccccgcccaggtgcagaccatcccggatgcgttggcgcaactggtg
gggcgttgggtgcgcacccgcgggccctttgtgttgcgcgaccttgcggacgcgttcggg
ctggccgtcggtgcggcgcatgcagcgctgatgccgctggtggacaaagaaaaggtcatc
gagggccgctaccggcagggcgtcgaggaacaggagtacgtcgccgccgaggtcttacgc
atcatccggtcgcgctcgctggcggcggcgcgcgcccagacccggccggtgtcgcagtcg
gcctatgggcgttttctgccttcgtggtcaaacgtcgctccggtgggagtcacgcccgcg
ctgcggggcgccgacggggtctactcagtgatcgagcagctcgccggggtgcgcctgccc
gcaagtgcttgggaatcacatattttcccgtcgcgcgtgggcgactactcgccggtgatg
ctcgacgagctcaccgccaacggcgaggtcgccatcgtcggcgccggcaaggcaggggcg
cgtgacccgtggatcatgctgctgcccgccgactacgcggcccaactcatgccgcaggtc
gaggagccactgctgtcgctgacccaatcccaggtgatggaaaaggtgcgccgcggcggc
gggttcctgttcggcgatctgcttgaaccctcgaccaccaccgaggagctgcgcgaggcc
atgtgggatctggtggaggccggcttcctcgcgccggattcgtttgctccgatccgggcc
cggttggcgggcgggaagaccgcgcaccgggcgcgccggcggccgcagcgaagcagggtg
cgctcggggcggacctcgttcgcgtcgacggtcccgcccgacatggtgggccgttggtcg
ctcacgcccacgcctgatagcgaccccacgcgtcgctcggtggctttaggggagtcgctg
ctggaccgctacggggtggtcacccgcggttcggtggtagccgaggacatcctgggcggg
ttcgcgctggcctacaaaaccttgtctggttttgaggaatcaggcaaggcgatgcgcggc
tacctcgtggaggggcttggggcctcgcagttttccaccccggccaccatcgatcggctg
cgcgggcaccaggacaccgacgacgtggtgggctggccctccggtgcgcgcgatccgcag
gtgcacgtgctggccgccaccgacccgtcgaacccctacggggcggcgctgccgtggccg
gcgcaggggccgacccgtgcggccggtgccatggtggtgcttgtcgacggcctcttagcc
gcccacatcacccgcggcgggagaaccatgaccaccttcttcgatttcttccccgacggg
gtaggggacccgatgccgttggtcgtcgatgccctgactcaagcggtccgggccggccgc
atgcagccgttgagcgtggaaaagcttaacggcggtcctgccttttctctgaaagacttc
ggggcgacggtgacccacaagggggcgaagatcggagggcgtgcctcggcacccccgaag
cggcgcgggcgcagcataacggaggcgctgggagagctagacggtgcaggggaggccgac
ggcaggcctgatttgggtggcccagcggatgggctcacctttgacgactag

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