Corynebacterium coyleae: CCOY_03965
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Entry
CCOY_03965 CDS
T09177
Symbol
uvrD3
Name
(GenBank) ATP-dependent DNA helicase UvrD1
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ccoy
Corynebacterium coyleae
Pathway
ccoy03420
Nucleotide excision repair
ccoy03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ccoy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CCOY_03965 (uvrD3)
03430 Mismatch repair
CCOY_03965 (uvrD3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccoy03400
]
CCOY_03965 (uvrD3)
Enzymes [BR:
ccoy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CCOY_03965 (uvrD3)
DNA repair and recombination proteins [BR:
ccoy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CCOY_03965 (uvrD3)
MMR (mismatch excision repair)
Other MMR factors
CCOY_03965 (uvrD3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
AAA_11
DEAD
ResIII
DUF2443
Motif
Other DBs
NCBI-ProteinID:
WJY79408
LinkDB
All DBs
Position
809466..811778
Genome browser
AA seq
770 aa
AA seq
DB search
MTDVTLGLNPQQQAAVVHEGSPLLIVAGAGSGKTAVLTRRIAYLLQNRGVAPWQILAITF
TNKAAAEMKERVGQLVGPEAERMWVATFHSVCVRILRQQAQLVPGLNTNFTIYDSDDSRR
LLGMIGKDMNLDLKKFSPRVLANAISNLKNELVDPDQAQAQAQRTHNPFETTVANVFAEY
QRRLRQSNALDFDDLIGEVVRIFKTHPQVTEYYRRRFRHVLVDEYQDTNHAQYELIHTLV
GDGPDAPELAVVGDSDQSIYAFRGATIRNIEEFERDYPDAETIMLEQNYRSTQNILSAAN
AVIAQNEGRRPKKLWTDHGTGEKIVGYVADNEHDEARFIATEIDALSDRGVPYSDIAVMY
RTNNASRALEDIFIRSGIPYKVVGGTRFYERREIRDIVAYLKVLENPDDTVSMRRIVNVP
KRGIGDKAQAMVALHSEQNNQSFGRSLIDATEGNVDMLAKAATNSITRFVDMMRGLRQDM
PNMVNEVTGMPDLGQLVAQVLDATGYKAELEASNDPQDGARLDNLNELVSVAREFSSDAA
NQMAYMTDEEIDEVMQEGEPAPGSLQAFLEKVSLVADADQLPDNEQGVVTLMTLHTAKGL
EFPVVFVTGWEDGQFPHLRALGDPAELAEERRLAYVGITRARERLYLTRAMLRSSWGAPV
TNPASRFLAEVPEDLIDWRRLEPERSFNADAWGSPSRPRTQMRSARRAPKQTVHKNLNLV
AGDRVNHAKYGLGTVLTVEGSGVRETVTIDFGSSGTVRLMTIGGVPMEKL
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atgactgatgtgacccttggcctgaacccgcagcaacaggcggccgtcgtgcacgaaggt
agcccgctgcttatcgtcgccggcgctggttccggcaaaactgcggtgctgacccgccgt
attgcctatttgctgcaaaaccgtggggtagcgccgtggcagatccttgccatcaccttt
actaataaggccgcagcggagatgaaggagcgcgtcggccaactcgtcggacctgaggcg
gaacgcatgtgggtggccacgttccactcggtgtgcgtgcgtattttgcgccagcaggcg
cagttggtgccggggttgaataccaacttcactatttatgattcggacgattcacgtcga
ctgctcggcatgatcggcaaagacatgaacttggatctgaagaagttctcgccgcgcgtg
ctggccaacgcgatttcgaatctgaaaaacgagttggtggatccggaccaggcgcaagca
caggcgcaacgcacccacaacccgttcgagaccacggtggcgaacgtgttcgcggaatat
cagcgccgcctgcgtcaatccaacgcgctcgatttcgacgatctgatcggcgaggtagtc
cgcatcttcaagacgcatccgcaggtcacggagtactaccggcgtcgcttcaggcatgtg
cttgtcgacgaataccaggacaccaaccacgctcaatacgaactcatccacaccctggtg
ggcgacggccccgacgcgcccgagctggcggtggtgggcgattctgaccagtccatttac
gccttccgtggcgcgacgatccgcaacatcgaggagttcgagcgcgactaccccgatgcg
gagacgatcatgctggagcagaactaccgctccacgcagaacatcttgagtgccgcgaac
gctgtcatcgcgcagaacgagggccgccgcccgaagaagctgtggactgaccacggcacg
ggggagaagatcgtcggctatgtcgcggacaacgagcacgacgaggcccgcttcatcgcc
acggaaatcgatgccctgtcggatcgcggcgtgccgtactcggatatcgcagtgatgtat
cgcaccaacaacgcctcgcgcgcgttggaagacattttcatccgctcgggtattccgtac
aaggtagtcggcgggacccgcttctacgagcgccgcgagatccgcgacatcgttgcttac
ctgaaggtgctagaaaacccggacgacacggtgagcatgcggcgcattgtcaacgtgcca
aaacgcggcattggcgacaaggcgcaagccatggtggcgctgcactcggagcaaaacaat
caaagctttgggcgttcgcttatcgacgccactgagggcaacgtggacatgctggccaag
gccgccacgaactccattacccgcttcgtggacatgatgagggggctccgccaggacatg
ccgaacatggtcaatgaggtcaccggcatgccagacctcgggcaactggtcgcccaggtg
cttgatgccaccggctacaaggcagagcttgaagcctccaacgacccgcaggacggggcg
cgcctggacaacctcaacgagttggtctctgtcgcccgtgagttctcctcggacgctgcg
aaccagatggcgtacatgaccgatgaagaaatcgacgaggttatgcaggaaggcgaaccc
gcgccgggatcactgcaggcgtttttggagaaggtttcgctcgtcgctgatgcggatcag
ttgccggacaacgagcagggcgtggtcacgttgatgacgttgcacactgcaaagggcctg
gagttcccggtggtgtttgttaccggctgggaggacggacagttcccacacctgcgtgcg
ttgggggatccagcggagctcgccgaggaacgtcgcctggcgtatgtggggattacgcgc
gcccgcgagcggctatatctgacgcgtgcgatgctgcgctcatcgtggggcgctccggta
accaacccggccagtcgcttcctcgcagaggtcccggaggacctcatcgactggcgcagg
ttggaaccggagcgctccttcaacgcggatgcgtggggctcgccctcgcgtccacgcacg
cagatgcgctctgcgcgccgtgcaccgaaacagacggtgcacaagaatttgaacttagtg
gccggagaccgcgtcaaccacgcgaagtacgggttgggcacggtcctcaccgtggaaggt
tccggcgtgagggagacggtaacaatcgatttcgggtcgtctggcaccgtcaggctgatg
accatcggcggggtgccgatggaaaagctttag
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