Corynebacterium coyleae: CCOY_05365
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Entry
CCOY_05365 CDS
T09177
Name
(GenBank) hypothetical protein
KO
K03628
transcription termination factor Rho
Organism
ccoy
Corynebacterium coyleae
Pathway
ccoy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ccoy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CCOY_05365
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccoy03021
]
CCOY_05365
03019 Messenger RNA biogenesis [BR:
ccoy03019
]
CCOY_05365
Transcription machinery [BR:
ccoy03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
CCOY_05365
Messenger RNA biogenesis [BR:
ccoy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CCOY_05365
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Rho_N
AAA_25
Spore_III_AA
NACHT
S1CSD-TOTE-2
DUF6751
Motif
Other DBs
NCBI-ProteinID:
WJY79682
LinkDB
All DBs
Position
1092596..1094602
Genome browser
AA seq
668 aa
AA seq
DB search
MAGTAAIFAPAPREIRQGYKVLLQSNPDETHRFQHAPSRVNYARTCWLSDERTHVTDTGT
AADLAAMKIPELRKIAAEKGLKGVSGLRKGELIQAITTGQVPKKAAPQKVEADNAEAPAA
SERAERKADKTDKPAENADKATDNSHDDDSRGASRSAARRARRNRARHQHEDNTQGGDAK
DGKDEKSEKSETTDNRDENRDNRDNRDNRDNNDRGGRNNGNNGNNRGGRNNHRDDNDDDH
QGGGRRGRRGRRNRNRNRDNHGGNNNQGGGNEQHFDPEDLQEVAGIADVQDNGSAFIRTT
GYRQSNSDVYVPQRLVRQAGLRSGDAVTGQVRANGQSHQQGNGRNRRSYNQVVRVDTING
QTPEDAKGRKEFHKLTPLYPNRRLRLETEPKILTTRVIDLVMPIGKGQRALIVSPPKAGK
TTILQNIANAIATNNPECYLMVVLVDERPEEVTDMQRSVNGEVIASTFDRPPSEHTAVAE
LAIERAKRLVEMGQDVVVLLDSITRLGRAYNNSSPASGRILSGGVDSNALYPPKRFLGAA
RNIEEGGSLTIIATAMVETGSAGDTVIFEEFKGTGNAELKLDRKIAERRVFPAVDVNPSG
TRKDELLMSPEEARVMHKLRRILSALDPQQSIDMLIKQLKKTKTNGEFLIGVANSAPMAQ
AETEEDYS
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcacagcggcgatttttgctcccgcaccccgtgagatccggcagggctacaaa
gttttacttcagtccaatcccgatgaaacgcaccgcttccagcatgcaccgtcgcgtgtt
aactacgcgagaacctgctggttgagcgacgaaaggacacacgtgaccgacaccggtacc
gcggcagacttggccgctatgaagattccggagctgcgcaaaattgccgccgagaaaggc
ctgaagggcgtttcggggctgcgtaagggggagttgatccaggcaattactaccggccag
gttcccaagaaggctgcaccgcaaaaggtggaggccgataacgcggaggcgccagctgct
tccgagcgtgcagagcgcaaggccgacaagaccgacaagcctgcagaaaacgctgacaag
gcgaccgacaattctcatgacgacgattcgcggggagcttcgcgttccgcagcgcgccgt
gctcgccgaaaccgtgcgcgtcaccagcatgaggacaatacgcagggtggcgacgccaag
gacggcaaggacgagaagtccgagaaatccgagaccacggacaaccgcgacgagaaccgc
gacaatcgcgataaccgcgacaaccgtgacaataacgaccgcggtggccgtaacaatggc
aacaacggcaacaaccgtggcggccgcaacaaccaccgcgacgataacgatgacgaccac
cagggtggcggtcgtcgtgggcgtcgcggtcgtcgtaatcgtaatcgcaaccgtgacaat
cacggcggcaacaacaaccaaggtggcggcaacgaacagcacttcgacccggaggacctg
caggaggttgcgggtatcgcggatgtgcaggacaacggctccgcgttcatccgcaccact
ggctaccgtcagtccaattcggacgtgtacgtgccgcagcgcctggtccgtcaggcgggt
ctgcgctccggcgacgcggtaaccggtcaggttcgtgctaacgggcagtcgcaccagcag
ggcaatggccgtaaccgtcgtagctacaaccaggttgttcgcgtcgacacgatcaacggc
cagactccggaggatgcgaagggacgcaaggagttccacaagctcaccccgctgtacccg
aaccgtcgtctgcgtctggaaactgagccgaagatcctgaccacgcgtgtgatcgacctg
gtcatgccgatcggtaagggtcagcgcgcactgatcgtgtcgccgccgaaggctggtaag
acgacgatcctgcagaacattgccaacgcgatcgccacgaataacccggagtgctacctc
atggttgtgcttgtcgatgagcgcccggaggaagttaccgacatgcagcgcagcgtcaac
ggcgaggtcattgcctcgacgttcgaccgtccgccgtcagagcacactgctgtcgccgag
cttgctatcgagcgtgcgaagcgtctggtggagatgggccaagacgttgtggtgctgctc
gactcgattactcgtcttggccgtgcgtacaacaactcctcgccggcgtcgggtcgcatc
ctctccggtggtgtggactccaacgcgctctacccgccgaagcgtttcctgggtgctgcc
cgaaacatcgaggagggtggctcgctgacgattatcgcaacggccatggtggaaaccggt
tccgctggcgataccgttatcttcgaggagttcaagggcaccggtaacgccgagctcaag
ctcgaccgcaagatcgcggagcgtcgcgtgttcccggctgtggacgtcaacccgtccggc
acccgcaaggacgagctgctgatgagcccggaggaggcgcgcgtcatgcacaagctgcgc
cgcatcctgtctgcgcttgatccgcagcagtccatcgacatgctgattaagcagttgaag
aagaccaagacgaacggcgagttcctcattggtgtggcgaactcggcaccaatggcgcag
gccgaaactgaggaggactactcctaa
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