Corynebacterium coyleae: CCOY_05920
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Entry
CCOY_05920 CDS
T09177
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
ccoy
Corynebacterium coyleae
Pathway
ccoy03030
DNA replication
ccoy03410
Base excision repair
ccoy03420
Nucleotide excision repair
ccoy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ccoy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CCOY_05920 (polA)
03410 Base excision repair
CCOY_05920 (polA)
03420 Nucleotide excision repair
CCOY_05920 (polA)
03440 Homologous recombination
CCOY_05920 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ccoy03032
]
CCOY_05920 (polA)
03400 DNA repair and recombination proteins [BR:
ccoy03400
]
CCOY_05920 (polA)
Enzymes [BR:
ccoy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CCOY_05920 (polA)
DNA replication proteins [BR:
ccoy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
CCOY_05920 (polA)
DNA repair and recombination proteins [BR:
ccoy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
CCOY_05920 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CCOY_05920 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
WJY79789
LinkDB
All DBs
Position
1207998..1210697
Genome browser
AA seq
899 aa
AA seq
DB search
MRKVVSWRPLDWLTVTTTSEKSKRLLLIDGHSMAFRAFYALPAENFSTSGGQHTNAVYGF
LSMFANILSDEKPTHAAVAFDVGRKTFRTERFPEYKAQREATPPEFKGQVPLIEDVLGDL
GIVTLSKENFEADDIVATLVTQARADGDYEIVLVSGDRDYIQLVDDTTTLLYPMRGVSTM
TRFNPAEVEKKYGLTAEQYPDFAALRGDPSDNLPNVPKVGEKTATKWITQYGTLEGLIEH
ADELKGQAANNFRERIDQVRLNRELTAMVTDVELPVAPGDLELKPADVAQVAARFDDLEF
GVNLRERVLAAVPTDGSAPEPETVELADVTVDNESLDTWLKSHEGQGLALYLSGTATPGS
GDLTALAIVDKQRHGIAKLAADLSADEDKALKTWLESDDPKFLHEAKAAYHMLRGRGIEL
RGIAHDTAIAAYLLRPGQRTYALEDVYQRHLQRQLSTSSDQLSLLDDSGDVDAAAAILEL
AAELSKDLREINSYELYANLELPLVTVLAEMEHIGIAVDLDVLEGLRKDLTHKVEQVEEQ
ARQLVDEPDLNLSSPKQLSVVLFDKLALPKTKKTKTGYSTAAAEIEALAEKNPHPFLDYL
LAHREHQKMKSTVEGLIKTVQPDGRIHTTFNQTVASTGRLSSAEPNLQNIPVRTEAGRKI
RSAFVVGEGYECLLTADYSQIEMRVMAHLSQDEGLIEAYRAGEDLHNFVGSRVFDVPIDQ
VTPELRRRVKAMSYGLVYGLSAYGLSQQLSISAGEAKGIMENYFERFGGVKRYLDEVVEQ
ARRDGYTSTVFGRRRYLPELTSDNRIARENAERAALNAPIQGTAADIIKVAMLRVDDALR
DYASRVLLQVHDELVLEVAPGELDAVQAIVEREMDKAIELLVPLEVSAGTGANWEEAAH
NT seq
2700 nt
NT seq
+upstream
nt +downstream
nt
gtgcggaaggtcgtgtcgtggcgcccgctagactggctgaccgtgactacaacatcggaa
aaatccaagcgtttgctgttgatcgacggccactcgatggccttccgcgcgttctatgcg
ttgcctgcggagaacttctccacgtcgggtgggcagcacacgaatgcggtgtacggattc
ttgtccatgtttgccaatattctttccgacgaaaagccgacgcacgctgccgtcgcgttc
gacgtgggccgaaagacgttccgtacggagcgtttcccggagtacaaggcgcagcgtgag
gctactccacctgagtttaaaggccaggttccgctgattgaggacgtgctgggggatctc
ggcattgtgacgttgagcaaggagaactttgaggcggacgatatcgtcgccacgcttgtg
acccaggctcgtgcagatggtgactacgagattgttctggtcagtggtgatcgcgactac
atccagcttgtcgacgacactacgaccctcctgtacccaatgcgtggcgtgtctacgatg
acgcgctttaacccggcggaggtggagaagaaatatggcctgacggctgagcagtacccg
gacttcgcggccctgcgtggcgacccgtcagacaacctgccgaatgtgccgaaagtgggg
gagaagaccgccaccaagtggattacgcagtacggcacgctcgaggggcttatcgagcat
gcggatgagttgaaggggcaagcagccaacaacttccgcgaacgcattgaccaggtgcga
ttgaaccgcgaactcaccgcaatggtcaccgatgtggaactgcccgtggcgccgggtgat
ctcgaactcaagccagccgatgtcgcccaggttgcggcgcgtttcgacgacctcgagttc
ggcgtgaatctgcgcgaacgcgtgctcgccgcggtaccgaccgatggcagcgcacccgaa
cctgagacggtggagctggctgacgtgacggttgataacgagtctctggacacctggctg
aagtctcatgaaggtcaaggccttgccctgtacctttccggtacggcgacgcctggatcg
ggtgatctgacggcgctggctatcgtcgataagcagcgccacggcattgcgaaacttgcc
gccgatctgtcggctgatgaggacaaggcgctgaagacctggctcgagtcggatgacccg
aagttcctgcacgaagccaaggctgcctatcacatgctgcgtggccgtggcatcgagttg
cgcggtatcgcacacgacactgcgatcgcggcgtatctgctgcgtcccggccagcgcacg
tatgcgctcgaggatgtgtaccagcgtcacctgcagcgccagctcagcaccagctctgat
cagctgagcttgctggatgattcgggcgacgtggatgcggctgcggcgattctggagctt
gccgcagagttgtccaaggacctgcgcgagatcaactcctacgagttgtacgcgaacctc
gaactgccactggtcacggtgctcgcggaaatggagcacattggcatcgccgttgatctg
gacgttctggaggggctgcgcaaggacctgacgcacaaggttgagcaggtcgaagagcag
gcgcgtcagctggtcgacgagccggacctgaacctatctagcccgaagcagctctctgtc
gtgctctttgacaagcttgcgctgccgaagacgaagaagacgaaaacgggctactcgact
gctgcggctgagatcgaagcactcgcagagaagaatccgcacccgttcctcgattatctg
ctcgcgcaccgtgagcaccagaagatgaagtccacggtggaaggcttgattaagacggtg
cagccggatggccggatccacaccacgtttaatcagactgtggcctcgacggggcgtctc
agctcggcggagccgaacctgcagaacattccggtgcgtactgaggccgggcgcaagatc
cgctctgcatttgtagttggcgagggctacgaatgcctgcttaccgccgactactcgcag
attgagatgcgtgtgatggcgcacctcagccaagacgagggcctgatcgaggcgtaccgg
gcgggggaggacctgcacaacttcgttggctcccgcgtgtttgatgttccgatcgatcag
gtcacgccagagctacgtcgccgggtcaaggcaatgtcctacggcctcgtctacggcttg
tctgcctacggcctgtcgcaacagttgtcgatctctgccggtgaggcgaagggcattatg
gagaactacttcgaacgattcggcggggtaaagcgctaccttgatgaggtcgtcgagcag
gcgcgtcgcgacggctacacctcgacggtgttcggtcgccgccgctacttgccggaactc
acaagtgacaaccgaatcgcgcgggagaacgccgagcgtgcggcgctgaacgccccgatc
cagggcactgctgcggacatcatcaaggttgcgatgcttcgtgtcgacgacgccttgcgc
gactacgcatcacgtgtcctcctgcaggtgcacgatgagttggtgctcgaggttgccccg
ggcgagctagacgccgtccaagcgatcgtggagcgcgaaatggacaaggcaatcgaactc
ctcgtcccgctagaggtgtctgcaggtactggcgcaaactgggaagaagcggcgcactag
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