Corynebacterium coyleae: CCOY_09320
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Entry
CCOY_09320 CDS
T09177
Symbol
rng
Name
(GenBank) Ribonuclease G
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
ccoy
Corynebacterium coyleae
Pathway
ccoy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ccoy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CCOY_09320 (rng)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccoy03019
]
CCOY_09320 (rng)
03009 Ribosome biogenesis [BR:
ccoy03009
]
CCOY_09320 (rng)
Enzymes [BR:
ccoy01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
CCOY_09320 (rng)
Messenger RNA biogenesis [BR:
ccoy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CCOY_09320 (rng)
Ribosome biogenesis [BR:
ccoy03009
]
Prokaryotic type
rRNA processing factors
CCOY_09320 (rng)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
IF2_N
S1
DUF7853
Motif
Other DBs
NCBI-ProteinID:
WJY80453
LinkDB
All DBs
Position
complement(1928442..1931249)
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AA seq
935 aa
AA seq
DB search
MAKNKSNRFADFDRSALSEKTRVFNLAKMLDVPSKDLVVALADLGLVKVAQSTLTKAEAD
MLLDALAAGASTTSDPERDKEADEKIRNRVRKDVENEIHQIEEKVEAELQTAEEPAEKPA
EEPAEEPAEEPLTDIEPEITPAPQEDPEEDRIPATHAPLFKAPTRSERRRATRKAKPAED
TASQKQQVDEPLEDGQVEDSGEGVVDTHSEIDEPVAIKGSSRLEAQRRRRSERREEHRKR
SRIVSQAEFLARRESVERHMVVRERERHDGQGRITQVGVLEDGMLVEHFVTSDAQASMIG
NIYLGRVQNVLPSMEAAFIDIGQGRNGVLYASEVDWKSAGLGGRSRRIEHALKSGDQVLV
QVTKDPIGHKGARLSTQISLAGRYLVYVPGGRSAGISRKLPTPERKRLKQILADVVPGKG
GAIIRTAAEGVSEEAIAADVNRLHNQWTSIQKRAEEEKNSKGAKPVTLYEEPNLLVKVVR
DLFNEDFTSLIVDGRKPWNTVHAYVQSVAPDLLDRLEKFDRNAHDGKDAFEEYRVDEQIS
KALSRTVWLPSGGTLVIDRTEAMTVIDVNTGKFTGSGGSLEETVTSNNLEAAEEIVRQIR
LRDIGGMIIIDFIDMILPENQDLVLRRLNEALGRDRTRHQVSEVTSLGLVQLTRKRLGTG
LLETFSKPCECCDGRGVVLTEDPVEAEERKPERPARKSRESKQSQRKPQQKQPLDDDHMD
ELLDSIFSSDKSANGSAEEPTEESAGEEKPRQTRRRGRRGGSRGRGRSDAPQRDGQRDSA
TTPERGERSEKPAQPEKPTQTYEEAVEEFEASPRRKRRTRGNSRSDHRPRREDFEQESQA
QQEQQVQQEEKTPKRSASRKSRSAEAGATVQVTTKTNRRGRRRVVRKSATSAPVRQHVAA
DPEDKPVKKETRRQAPAARRGRRRATRRGGGRGLE
NT seq
2808 nt
NT seq
+upstream
nt +downstream
nt
ttggctaaaaataaatcaaaccgtttcgccgattttgaccgctcggcgctgtcggaaaag
accagggtgttcaacctggcgaaaatgcttgatgtcccatcgaaggacttggttgtcgca
ctcgcagacttaggtctggtgaaggttgcgcagtccacgctgaccaaggcggaagcagac
atgcttctcgacgccttggcggcaggggccagcaccacatccgaccctgagcgcgataaa
gaggcggatgagaagatccgtaaccgcgtgcgcaaggacgtggaaaacgagatccaccag
atcgaagaaaaggtcgaggcggaactgcagacggctgaagaaccggccgagaagcctgcc
gaagaaccagcggaggaaccggccgaggaaccgctcaccgatatcgagcccgagatcacc
ccggcgccgcaggaggatccggaagaggatcgcatccccgctactcacgcgccgctgttt
aaggcaccgacgcgttcggaacgccgccgcgccacccgcaaggcgaagccggccgaggac
accgcctcacagaagcagcaggtagacgagccactcgaagatggccaggtagaggattcg
ggtgagggtgtcgtcgatacgcacagcgagatcgacgagcctgtggcgatcaaggggtcg
tctcgtctggaggcgcagcgccgtcgtcgctcggagcgccgcgaggaacaccgcaagcgc
tcccgcattgtgagccaggcggagttcttggcgcgccgcgaatcggtcgagcgccacatg
gtcgtgcgtgaacgggagcgccacgacgggcaggggcggatcacgcaggttggtgtgctt
gaagacggcatgctcgtcgagcactttgtcacctccgatgcgcaggcctcgatgattggc
aacatctacctggggcgtgtgcaaaacgtgctgccgagtatggaagctgccttcatcgac
atcgggcagggccgcaacggtgtgctctacgccagcgaggtggattggaagtctgccggc
ctcggtgggcgttcgcgccgcatcgagcatgcgctgaagtccggcgaccaagtactggtg
caggtgactaaggatccgatcgggcacaagggtgcacggttgagtacccagatttcgctc
gcgggccgctacctcgtctacgtcccgggtgggcgcagcgcaggtatctcccgcaagttg
cctaccccggagcgcaagcgcctcaagcagatccttgcggacgtggtgccgggcaagggc
ggtgccatcatccgcaccgccgcagagggcgtcagcgaggaagcgattgctgcggacgtg
aaccgtctgcacaaccagtggacctcgatccaaaaacgtgccgaggaggagaaaaactcc
aagggtgccaagccggtgaccctctacgaagagccgaacctgctggtcaaggttgtgcgc
gacctgttcaatgaggacttcacctccctgatcgtggatggccggaagccctggaacacc
gtgcacgcgtacgtgcagtcggttgcgccggatctgctggaccggttggagaagttcgac
cgcaacgcacacgacggcaaggatgcgttcgaggaataccgcgtcgacgaacagatctcc
aaggcactgtcgcgcaccgtgtggctgccgtcgggcggtacgttggtcattgaccgcact
gaggcgatgacggtgatcgacgtcaacaccggcaagttcaccggctccggtggctcgctg
gaggagacggtcacctcgaacaacctcgaggcggctgaggagatcgtgcgtcagattcgc
ctgcgcgacatcggcggcatgatcatcatcgacttcatcgacatgatcctgccggaaaac
caggacctcgtgctgcgccgtctcaacgaggcgctgggccgcgaccgcacccgccaccag
gtctctgaggtgacctcgctgggcctggtgcagttgactcgcaaacgcctgggcaccggc
ctgttggagacgttctccaagccgtgcgagtgctgcgacggccgcggtgttgtgctcact
gaggaccccgtcgaggccgaggagaggaagcccgagcgccctgctcgcaagtcgcgcgag
tcgaagcagtctcagcgcaagccgcagcagaagcagccgcttgacgacgaccacatggac
gaactgctcgactccatcttctcctctgacaaatctgcaaacggctccgctgaggagccg
actgaagagtcggctggcgaagagaagccgcgccagacccgccgtcgcgggcgccgtggc
ggcagccgtggccgcggccgctccgacgccccgcagcgtgatgggcagcgtgacagcgcc
accaccccggagcgcggcgagcggtccgagaagccggcgcagccagagaagccgacccag
acgtacgaggaagcggttgaggagttcgaggcctcgccgcgccgcaagcgtcgcacgcgc
ggcaactcccgatccgatcacaggccgcgccgggaagacttcgagcaggagtcgcaagcg
cagcaggaacagcaggtacagcaggaagaaaagaccccgaagcgcagtgcgtctcgtaaa
tcgaggagcgcagaagcaggggcaaccgtgcaggtgacgacgaagacgaaccgtcgtggt
cgccgtcgtgttgtccgcaagtcggcaacctctgcgccggtgcgtcagcacgtcgcagcg
gatccggaggacaagccggtgaagaaggagactcgtcgacaagcgcctgctgcacgacgt
ggccgccgccgtgctacccgacgtggtggcgggcgcggtttggagtaa
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