Chondrus crispus (carragheen): CHC_355 Help Entry CHC_355           CDS       T02916                                  Symbol clpC Name (RefSeq) Clp protease ATP binding subunit   KO K03696   ATP-dependent Clp protease ATP-binding subunit ClpC Organism ccp  Chondrus crispus (carragheen) Brite KEGG Orthology (KO) [BR:ccp00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03110 Chaperones and folding catalysts [BR:ccp03110]     CHC_355 (clpC) Chaperones and folding catalysts [BR:ccp03110]  Heat shock proteins   HSP100    CHC_355 (clpC) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  AAA_2 Clp_N AAA_lid_9 ClpB_D2-small AAA AAA_5 AAA_22 AAA_16 Sigma54_activat nSTAND3 TniB AAA_18 AAA_14 Zeta_toxin IstB_IS21 AAA_28 TsaE NACHT UVR AAA_7 AAA_23 AAA_25 RsgA_GTPase Torsin ATPase_2 DNA_pol3_delta2 DAHP_snth_FXD Motif Other DBs NCBI-GeneID:  14971182 NCBI-ProteinID:  YP_007627346 UniProt:  M5DDC7 LinkDB All DBs Position PT AA seq 822 aa AA seqDB search MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGIAAQVLKSMNVNLKDAR IEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLMGLVREGEGVA ARVLENLAVNVSSIRTEVIQMLGDNAEASANGNSNMQARSKTPTLEEFGSNLTELAIEGV LDPVVGRQKEIERVIQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIANRDIPSILEDKL VVTLDVGLLVAGTKYRGEFEERLKRIMDEIKSADNVILVIDEVHTLIGAGAAEGAIDAAN LLKPALARGELQCIGATTLEEYRKHIEKDAALERRFQPVLVGEPSVEETIEILFGLRDRY EKHHQLKMSDSALAAAAKYANQYISDRFLPDKAIDLIDEAGSRVRLLNSQLPPAARELDK ELRSVLKTKDEAIRAQKYEKAEQYRTREMEIKAQIAAIAQSKKSEPDLQIEDPIVTEEDI AEIVAFWTGIPVTKLTKSESEKLMHMEETLHSRIIGQDEAVVAVSRAIRRARVGLKNPNR PIASFIFSGPTGVGKTELTKALASYFFGAQQAMVRLDMSEYMERHTVSKLIGSPPGYVGY SEGGYLTEAVRKRPYTVILFDEIEKAHPDIFNLLLQILEDGRLTDAKGRTIDFKNTLLIM TSNIGSKVIEKGGGSLGFELGESQTESQYNRIKSLVNEELKQYFRPEFLNRLDEIIVFRQ LTKDEVREIADIMLQEVFERIKQQEIELDVTERFKNRLVDEGYNPSYGARPLRRAVMRLL EDSLAEEVLSGKIKAGDSAVVDVNDDGKVTVLLGEKLEVLSS NT seq 2469 nt NT seq  +upstreamnt  +downstreamnt atgtttgaacgttttacagaaaaagctattaaagttataatgttagctcaagaagaagca agaagattaggccataattttgttggtacagaacaaatccttttaggtctaattggtgaa ggaacaggtattgctgcacaagttttaaaatccatgaacgttaatttaaaagatgctcga atagaagtagaaaaaattattggtcgtggttctgggtttgttgcagtggaaatacctttt actcctagggcaaaacgagttcttgaattatcattagaagaagcaagacagttaggccat aattatataggtacagaacatttattgatgggattagtacgtgaaggtgaaggagttgct gcacgtgtactagaaaatttggctgtaaatgtttcttctattagaacagaagtcattcaa atgttaggtgataatgcagaagctagtgctaatggtaatagcaatatgcaagcaagaagc aaaacacctactttagaagaatttggatcaaatttaactgagttagcaatagaaggtgta ctagatcctgttgttggtaggcaaaaagaaatagagcgagtaattcaaattttaggtcgt agaactaaaaataatcctgtattaataggcgaaccaggtgttggtaaaactgctattgca gaaggtttagctcaaagaatagctaatagggacattccttctattttagaagataagcta gttgttacattagacgttggacttttagttgcagggacaaaatatagaggtgagtttgaa gaaagattaaaaagaattatggatgaaattaagtctgcagataatgtaattttagttata gatgaagttcatacattaataggtgcaggtgcagctgaaggtgcaatagatgctgcaaat ctattgaagccagcattagcccgaggtgaattgcagtgtataggagctactactcttgaa gagtatcgtaagcacatagaaaaagatgctgcattagaaaggcgttttcagccagtatta gtaggtgagccaagtgttgaagaaacgatagaaattttatttggtttgagagatcgttat gagaaacatcatcagctgaaaatgtcagatagtgctttagctgcggcagctaaatatgct aatcaatatatttcagatagatttttgccagataaagcaattgatttaattgatgaagca ggttctcgtgtacgtttactaaattctcaactaccacctgctgcaagagagttagataaa gaattgagatcagtattaaaaacgaaagatgaagcaataagagctcaaaaatatgaaaaa gcagagcagtatagaacacgtgaaatggaaatcaaagctcaaattgctgcaattgcacaa agtaaaaaaagtgagccagatttacaaatagaagatcctattgttacagaagaagatatc gctgaaatagttgcattttggacagggattcctgtaactaagctaactaaaagtgaatct gaaaaattgatgcatatggaggaaacattacacagtcgtattataggtcaagatgaagct gtagttgctgtctcaagagctattaggagagcacgagtaggtttaaaaaatcctaacagg cccatagctagctttattttttctggccctactggcgttggtaagacagaattaactaaa gcattagcgtcatatttttttggtgcgcaacaagcaatggtgcgtttagatatgtccgaa tatatggaaagacatacagtgtcaaaattaataggttctcctcctggttatgttggatat agtgaaggaggctatttgacggaagctgttagaaaaaggccatataccgtaattcttttt gatgagattgaaaaagctcacccagatatctttaatcttttattacaaattttagaagat ggacgattaactgatgctaaaggtagaacaattgattttaaaaatactttgttgataatg acatctaacatcggttctaaagttattgaaaaaggaggtggtagtcttggttttgaatta ggcgaatctcaaacagaatctcaatataatcgtattaagtcattagtcaatgaagagtta aagcaatattttcgcccagaatttttaaatagattagatgaaattattgtatttagacaa ttgactaaagatgaagttcgagaaatagcagatattatgttacaagaagtatttgagcgt attaagcaacaagaaatagaattagatgttacagaaagatttaaaaatcgtttagtagat gaaggctataatcctagttatggtgctcgtccactacgccgtgctgttatgagacttttg gaagatagtttagcagaagaagttctgtctggaaaaataaaagcaggcgatagtgctgtc gtggatgtaaatgatgatggtaaagtaacagttctattaggagaaaaattagaggtatta tcatcataa

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