KEGG   Chondrus crispus (carragheen): CHC_T00000014001
Entry
CHC_T00000014001  CDS       T02916                                 
Name
(RefSeq) hypothetical protein
  KO
K12872  pre-mRNA-splicing factor RBM22/SLT11
Organism
ccp  Chondrus crispus (carragheen)
Pathway
ccp03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ccp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    CHC_T00000014001
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ccp03041]
    CHC_T00000014001
Spliceosome [BR:ccp03041]
 Complex B
  Other components
   Prp19-related factors
    CHC_T00000014001
 Complex C
    CHC_T00000014001
SSDB
Motif
Pfam: STL11_N RRM_1 zf-CCCH_RBM22 Torus zf-CCCH_3 zf-CCCH zf_CCCH_4 zf-CCCH_12 zf-CCCH_10 zf-CCCH_2
Other DBs
NCBI-GeneID: 17325539
NCBI-ProteinID: XP_005717821
UniProt: R7QHF4
LinkDB
AA seq 440 aa
MASGKQAATGNPGDEFPILCETCLGPNPYIRMTRHAWGNACKVCERPFTSFRWRPAGQGT
RPKKTEVCQTCARAKNVCQTCLLDLQYGLPVQVRDASLAPGDRQRAVVPQSDGTREYAAA
QSERAIATGIVDRVYAAPTVNSIAERAKRTAPKYERNRARVCSFFLKGTCTRGLYCPYRH
EKPEKDEESGMAEQNIRDRYYGVNDPVAAKIFGNLGMSADGKQAVVSKRGGGAAAPPVPE
DGSVKSLFIGGVKPGVDEESLRQLFSGCARLSRMSVLTSRGIAFVDFADRAAAEEAMQRV
HGAQDVNGCRVFVNWARGSTNKRARVPDPSQHLDASRDGGKGGGHGLQPAALSAAEDYTV
KRQRAEPAATAPRSAADAAHRPVRPAHTPPQDAAKTIVLGKVSSFPRPTASAIRDKSALP
PAIAYTSQNPSQLGSVVRRK
NT seq 1323 nt   +upstreamnt  +downstreamnt
atggcgtctggcaaacaagccgcgacgggcaaccccggcgacgagttcccaattctgtgc
gagacgtgtctgggtccgaacccgtacatccgcatgacgcgccacgcgtggggaaacgcg
tgcaaggtgtgcgagcggccgttcacgtcgttccggtggcggccggcggggcagggcacg
cggcccaagaagacggaggtgtgccaaacgtgcgcgcgcgcgaagaacgtgtgccagacg
tgcctgctggatctgcagtacgggctgccggtgcaggtgcgcgacgccagcctggcgccg
ggcgaccggcagcgcgccgtcgtgccgcagagcgacggcacgcgcgagtacgccgccgcg
cagtcggaacgcgccatcgccaccggcatcgtcgaccgcgtctacgccgcgcccaccgtc
aactccatcgcggagcgcgcgaagaggaccgcgcccaagtacgagcgcaaccgcgcgcgc
gtgtgctccttcttcctgaagggcacctgcaccagaggcctgtactgcccgtacagacat
gagaagcccgagaaggacgaggagagcggcatggccgagcaaaacattcgcgaccgctac
tacggcgtgaatgaccccgtggccgccaagattttcggcaacctaggcatgtctgcggac
ggcaagcaggcggtggtgtcgaagaggggcggcggggctgctgcgccgccggtgccggag
gatgggagtgtcaagagcctgttcatcgggggcgtgaagccgggcgtggatgaggagagc
ttgagacagctgttttcggggtgcgcacgcctttcccgcatgtccgtgctcacgagtcgg
ggaatcgcatttgtggactttgcagaccgagccgcggctgaggaagcgatgcaaagagtg
cacggggcgcaggacgtgaatgggtgcagagtattcgtgaattgggcgcgcgggagcacc
aacaaacgagctcgcgttcctgacccgtcccagcacctcgacgcgtcacgcgatggcggc
aagggcggcgggcatggccttcaacccgccgccctttcggcggccgaggattacacggtc
aaacgacagcgggcggagccggcagcaacggcgccacggtcagctgcagacgctgcgcac
agacccgtgagaccggcacacacgcccccccaggatgcagccaagactatagtgttgggg
aaagtgtcctccttccctaggccgaccgcgtctgcaatacgggacaaaagcgctctacca
ccagccatagcttacaccagccagaatccgtctcagcttggaagtgtcgtgcgaagaaag
tag

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