Chondrus crispus (carragheen): CHC_T00000014001
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Entry
CHC_T00000014001 CDS
T02916
Name
(RefSeq) hypothetical protein
KO
K12872
pre-mRNA-splicing factor RBM22/SLT11
Organism
ccp
Chondrus crispus (carragheen)
Pathway
ccp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CHC_T00000014001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccp03041
]
CHC_T00000014001
Spliceosome [BR:
ccp03041
]
Complex B
Other components
Prp19-related factors
CHC_T00000014001
Complex C
CHC_T00000014001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
STL11_N
RRM_1
zf-CCCH_RBM22
Torus
zf-CCCH_3
zf-CCCH
zf_CCCH_4
zf-CCCH_12
zf-CCCH_10
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
17325539
NCBI-ProteinID:
XP_005717821
UniProt:
R7QHF4
LinkDB
All DBs
AA seq
440 aa
AA seq
DB search
MASGKQAATGNPGDEFPILCETCLGPNPYIRMTRHAWGNACKVCERPFTSFRWRPAGQGT
RPKKTEVCQTCARAKNVCQTCLLDLQYGLPVQVRDASLAPGDRQRAVVPQSDGTREYAAA
QSERAIATGIVDRVYAAPTVNSIAERAKRTAPKYERNRARVCSFFLKGTCTRGLYCPYRH
EKPEKDEESGMAEQNIRDRYYGVNDPVAAKIFGNLGMSADGKQAVVSKRGGGAAAPPVPE
DGSVKSLFIGGVKPGVDEESLRQLFSGCARLSRMSVLTSRGIAFVDFADRAAAEEAMQRV
HGAQDVNGCRVFVNWARGSTNKRARVPDPSQHLDASRDGGKGGGHGLQPAALSAAEDYTV
KRQRAEPAATAPRSAADAAHRPVRPAHTPPQDAAKTIVLGKVSSFPRPTASAIRDKSALP
PAIAYTSQNPSQLGSVVRRK
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctggcaaacaagccgcgacgggcaaccccggcgacgagttcccaattctgtgc
gagacgtgtctgggtccgaacccgtacatccgcatgacgcgccacgcgtggggaaacgcg
tgcaaggtgtgcgagcggccgttcacgtcgttccggtggcggccggcggggcagggcacg
cggcccaagaagacggaggtgtgccaaacgtgcgcgcgcgcgaagaacgtgtgccagacg
tgcctgctggatctgcagtacgggctgccggtgcaggtgcgcgacgccagcctggcgccg
ggcgaccggcagcgcgccgtcgtgccgcagagcgacggcacgcgcgagtacgccgccgcg
cagtcggaacgcgccatcgccaccggcatcgtcgaccgcgtctacgccgcgcccaccgtc
aactccatcgcggagcgcgcgaagaggaccgcgcccaagtacgagcgcaaccgcgcgcgc
gtgtgctccttcttcctgaagggcacctgcaccagaggcctgtactgcccgtacagacat
gagaagcccgagaaggacgaggagagcggcatggccgagcaaaacattcgcgaccgctac
tacggcgtgaatgaccccgtggccgccaagattttcggcaacctaggcatgtctgcggac
ggcaagcaggcggtggtgtcgaagaggggcggcggggctgctgcgccgccggtgccggag
gatgggagtgtcaagagcctgttcatcgggggcgtgaagccgggcgtggatgaggagagc
ttgagacagctgttttcggggtgcgcacgcctttcccgcatgtccgtgctcacgagtcgg
ggaatcgcatttgtggactttgcagaccgagccgcggctgaggaagcgatgcaaagagtg
cacggggcgcaggacgtgaatgggtgcagagtattcgtgaattgggcgcgcgggagcacc
aacaaacgagctcgcgttcctgacccgtcccagcacctcgacgcgtcacgcgatggcggc
aagggcggcgggcatggccttcaacccgccgccctttcggcggccgaggattacacggtc
aaacgacagcgggcggagccggcagcaacggcgccacggtcagctgcagacgctgcgcac
agacccgtgagaccggcacacacgcccccccaggatgcagccaagactatagtgttgggg
aaagtgtcctccttccctaggccgaccgcgtctgcaatacgggacaaaagcgctctacca
ccagccatagcttacaccagccagaatccgtctcagcttggaagtgtcgtgcgaagaaag
tag
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