Chondrus crispus (carragheen): CHC_T00000039001
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Entry
CHC_T00000039001 CDS
T02916
Name
(RefSeq) hypothetical protein
KO
K03256
tRNA (adenine58-N1)-methyltransferase non-catalytic subunit
Organism
ccp
Chondrus crispus (carragheen)
Brite
KEGG Orthology (KO) [BR:
ccp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ccp03016
]
CHC_T00000039001
Transfer RNA biogenesis [BR:
ccp03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
CHC_T00000039001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Gcd10p
DndB
Motif
Other DBs
NCBI-GeneID:
17325484
NCBI-ProteinID:
XP_005717779
UniProt:
R7QJI5
LinkDB
All DBs
AA seq
418 aa
AA seq
DB search
MSPDEQIQEDNWVVLSATDGKKVLGHVSRNSSARIGKRKRKIGALLGARWGDLFAVRSGD
RLEPVEEEQSFNVTAETEMGTERNNQYLEDTNENQKLEQSTILAMKEQGIEGEQLVRTVV
ENSLTFRGKTAFSQEKYIKRKRAKFDLKVRVLRPTALTLCETYFERSPEKTMHLRPDGLA
ILLGYAGVRSGCRALVYENCTGLVTAAVAERIDGVGKVINIFSGTTPPGTEVIRMLNLDS
LHTKAIVHTPIELLGMVDVSQSEDNDPLRYVTVEDAITEKTGTKHVPSARRAEAIAMRAK
RGDVKSWIRDGCDCLIVATRFDVVQVFDVLLKHLAPSGCFAAYCMHLQDAADLQYALQLS
KMAMRVELLEVSLVNHQVLPGRSHPAMTDSATGGYIVSGVRIAMPSAMASSDNGEKSN
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgagtcctgatgaacaaatccaagaggacaactgggtcgtgctttcggcgactgatgga
aagaaggtcctcgggcacgtgagcagaaactcttcggcaagaattgggaagcgaaaacga
aaaatcggtgcgctgcttggtgcgagatggggagatttgttcgccgttcgctcaggcgat
cgcttggaacctgtcgaagaggagcaatcttttaacgtgacagcggaaacagaaatgggg
actgaacgaaacaaccagtatcttgaagacactaacgagaaccagaagctggagcaaagc
acaatacttgccatgaaggagcaaggaattgaaggggaacaacttgttcgcacggttgtc
gaaaactcactgacattccgcggaaagacggccttctcccaggaaaagtatatcaagcgg
aaacgggcgaagtttgacttaaaggtcagggttttgcgacctacggcgttaacattatgt
gaaacgtactttgagaggtctccggaaaagacgatgcaccttcgcccagacgggcttgcg
attttgcttggatacgccggtgtaaggtctggatgccgagctcttgtttacgaaaattgc
accggtttggtgactgcggcagtggctgaaagaatagatggtgttggaaaggttattaac
attttctcggggaccactccgcctggcactgaagtgattcgaatgctcaacctggacagc
cttcacacaaaagccattgtgcacactccaatagagttgctgggcatggtggacgtctca
caatcagaagataacgatcctctacgatacgtcacagttgaggacgcaattacagaaaaa
acgggaacgaagcatgttccaagcgcacggcgagctgaagcgattgcgatgcgtgcgaaa
cgaggggatgtcaagtcatggattcgtgatggttgtgattgcctcattgttgcaactcgc
ttcgatgttgtgcaagtatttgatgttctactaaagcatttggcaccatctggatgcttt
gccgcgtattgtatgcatttgcaggatgcggcagatctgcagtatgcccttcagctatca
aaaatggccatgcgggtggagttactggaagtctctctagtcaatcaccaggttcttccc
ggtcgatctcaccctgctatgacggatagcgccactggtggatacatcgtgagcggggtt
aggatagccatgcccagtgcgatggcatcttcagataacggagaaaagagcaactga
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