Chondrus crispus (carragheen): CHC_T00000040001
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Entry
CHC_T00000040001 CDS
T02916
Name
(RefSeq) hypothetical protein
KO
K14787
multiple RNA-binding domain-containing protein 1
Organism
ccp
Chondrus crispus (carragheen)
Brite
KEGG Orthology (KO) [BR:
ccp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ccp03009
]
CHC_T00000040001
Ribosome biogenesis [BR:
ccp03009
]
Eukaryotic type
90S particles
Other 90S particles
CHC_T00000040001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
17325485
NCBI-ProteinID:
XP_005717780
UniProt:
R7QIL2
LinkDB
All DBs
AA seq
917 aa
AA seq
DB search
MSRLIIKGLPSRYDDKNLRQLFSFAGEVTDAKVIKTKDGRSRQFGFIGFRNGQEAKKARH
QLNNSYVDTQRVSVDFAHAVGANTIPRPWSKYSEGSSLHKKNNADDDVSIRKAFLKKEAE
RNRRIRELKAKQREDGVKDGDIAALREFQESAGKRGSNPLWADGGIRALEKSTLVASRKT
GGEGTFLERKHVKFDVPDSDDEDDGLYEDLPDSSALNEEKADGDGDATEKGDGLALDEGI
SDMDYFKSKVVAQNEGEDKASESQKSVSVEAADTELQEHNENRAPETSQESDESDEEQQA
GKSSENAAEKRTQNANENRLESKFPSRDGNAERKADASETGRLLVRNLAYSMTDEELEML
FEPFGTLADVHVVRDRQSGKSRGMAFVQYVTAENAPQALLSVDGTFHSGRILHVLPAQPR
PALLDNYSATSGTTKAGNSKFKEGREESLKDSARKGLDAHAQHALHLSSDAVAQVMADRH
SVSKADLFGTSRGESGVAAVRLAMAEATVQGETKQFLLENGVNLGLLQQMNEDLHATTAA
ARRKRQSRTAFLVKNLPARTHERQLEGTFSRFGKLKRLVVVPSGTLAVVEYGISSNAKKA
YNSLAYTKFQDAPLYLEWLPAQALTPVHDDNKLDKSSTLAENEPENKDPTSVAEGVSTTP
ENVEAKTGSVYVKNLNFETRDAALKEHFQKVLRKRPKVVASLRSATVALRRKNEGKASER
LSMGFGFLEFSSRAHAIEAVKNAQNTTLDGHTLQLRLSNKDDEDRSQGAKRKRVSSKGKK
PGPKLIVRNVAFEATRSDIRQLFSAFGQLKTVRIPRKIDGSHRGFAFVEFVSKNEAKTAY
EALSASHLYGRHLVIEYAEDTGTGFASIAEMQARAATQIARKRTRMSDGSNVAASGGEEP
SDELVDEQAMLEDELYA
NT seq
2754 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaggttgataatcaaaggtttgccaagccggtacgatgacaagaacttgaggcaa
ctgttctctttcgccggggaagtcacggacgcgaaagttatcaaaacgaaagatggtcgg
tctcgccagtttggtttcatcggctttcgaaacggacaggaagcaaagaaagcgcgccat
caactgaacaattcttatgttgatacacagcgggtctcagtggacttcgcgcatgctgtg
ggcgcaaacaccatccccagaccgtggtccaaatattcagaggggagcagtctgcataaa
aagaacaatgcagacgatgatgtcagtatccgaaaagcatttcttaagaaagaggcagag
aggaacaggcgcattcgggagctcaaagcgaagcagagggaggacggggtaaaagacgga
gacatcgctgcattgcgcgagtttcaagaatcagcggggaagcgaggatcaaacccgttg
tgggcagatggaggaattcgcgcgttggagaaaagcacactcgtcgcttctaggaaaacg
ggcggagaaggaacatttttggaaagaaagcatgtgaagtttgatgtgccagacagcgac
gacgaggatgacggattatacgaggatcttccagactcttccgctttaaatgaagaaaaa
gcagacggagacggagatgccacggaaaagggagatggtttagctctggatgagggcatt
tcagacatggattacttcaaatctaaagttgtggcacaaaacgagggcgaggataaggct
tcggaatcgcaaaagagtgtcagcgtcgaagctgcagacaccgaacttcaagaacacaat
gagaaccgagcacctgaaacgtcacaagaatctgatgaaagcgatgaggaacaacaggct
ggtaaaagtagcgaaaatgctgcagagaagaggactcaaaatgcgaatgaaaatcgtttg
gaatcgaaatttccatcgcgtgacggcaatgcggagcgtaaggctgatgcgtctgagacc
gggcgcttactcgttcgaaacctggcatactcaatgactgatgaagaacttgagatgctg
tttgagccatttgggactctggcagatgttcatgtagtaagagatagacagtccggcaag
tcacgaggcatggcattcgtgcagtatgtgacagccgagaatgcccctcaagcacttttg
tctgttgatgggacatttcacagtggccgcatactgcatgtgcttccagcacagcctcgc
ccggcgctcttggataactactccgcaaccagcggtaccacaaaagcagggaatagcaaa
tttaaagagggcagagaggaatcattgaaagactctgcgcggaaaggattggatgctcac
gctcaacatgcgctacatttgtcttctgacgccgttgctcaggtcatggcagatcggcat
tcggtttcgaaagctgaccttttcggtacaagtcgcggtgagtctggtgtagctgcggtt
agacttgcaatggcagaagcaactgtacaaggggagactaagcagtttctgctggagaat
ggagttaacctaggtttattacaacaaatgaacgaggatctgcatgccacaacagcagct
gctagaagaaagagacagtcaaggacagcctttttggtgaagaatttaccggctagaaca
catgaaaggcagctcgagggtacgttcagtcgttttggaaagctgaaacgtcttgtcgtt
gtgccatccgggactcttgctgttgtcgagtacggcatttcgtcaaacgccaaaaaagcg
tataactcccttgcttacacaaaattccaggatgcgcctctctacttggaatggcttccc
gcgcaggcactgacgccagttcacgacgacaacaaactggacaaatcgtcgactctcgct
gaaaatgagcccgaaaacaaggaccccacaagcgttgctgaaggtgtgtcgacaactcct
gagaatgtagaagccaaaaccggcagcgtgtatgtgaaaaacctgaatttcgaaactcgc
gatgccgcgcttaaggagcactttcaaaaggtgctgcggaaacgcccgaaagttgtggca
agtttgcgatcggctactgtggctctgcggcgaaagaacgagggaaaagcctcagaacgt
ctttcaatgggtttcgggtttctggaattttcgtcgagagcgcatgcaatagaagccgtg
aagaatgctcagaataccactcttgacggtcatacactgcaattacggctctcaaacaag
gatgatgaagatcgaagtcaaggagctaagcgaaaacgggtttcatcgaagggcaagaag
ccagggcccaagctgatcgtaagaaatgtcgcctttgaagcaacaagaagcgatattcga
cagctattctctgcgtttggtcaactgaagacggttcgaatacccagaaaaattgatggt
tcacatcgtggcttcgcgtttgtcgagttcgtttccaaaaatgaagccaaaacggcctat
gaggctttgtcggcatctcatttgtacggaagacatttggtcatagaatacgcagaggac
accggcactggctttgcctctatagccgaaatgcaagcgagagctgctacacaaatagca
aggaagcgaactcggatgagcgatggaagtaatgttgctgcaagtggtggggaagagcca
agtgatgagctcgttgacgaacaggcgatgctcgaggatgagctgtacgcttag
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