Chondrus crispus (carragheen): CHC_T00000096001
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Entry
CHC_T00000096001 CDS
T02916
Name
(RefSeq) hypothetical protein
KO
K22804
structural maintenance of chromosomes protein 6
Organism
ccp
Chondrus crispus (carragheen)
Brite
KEGG Orthology (KO) [BR:
ccp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccp03400
]
CHC_T00000096001
DNA repair and recombination proteins [BR:
ccp03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
CHC_T00000096001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_29
Fez1
AAA_13
Motif
Other DBs
NCBI-GeneID:
17326739
NCBI-ProteinID:
XP_005719003
UniProt:
R7QKQ0
LinkDB
All DBs
AA seq
1207 aa
AA seq
DB search
MPRRGRSQDDLESKLPKRARLDLSYADDEDEDRIEPAPPRAKRGRQSRQLPQNEDEDDIK
SVSQQGNATSYAYGSRPSTQRGGARVVPSDGEGDEGTDADDGNDDDEEDEETVQQQIRLS
TEKGFAHSGILHSVRLDRFMSHTCFEYMLGPNMNIINGKNGSGKSAIVAALQVGLNGKVG
ITERAKKLEELIKHGEDSAIITIKLLNRKPPQTENGVVEADLTYKHDVYGDIITIERRIT
KGTSPNSFAVKAKNKHVKLEEGVTTKQEVQNICDHFGIMVENPVAILTQTKSKEFLAKGK
PEQHFKLFQKATLLGPLQDELMNTKIITKQVDSMLKSNVEKAPEAEEKVRKKEEAHQQAQ
EMMNIDQIIRQAESAFAWTLLQEEEIKLHKYETKTAQEFEPEAEAARVALEKLQTKLDGL
KNEQIEHNEKLQEATERSSHLSVSCRDFKRKAQTIKFDIERQRRRIQEFEADRDKYRRDI
SNANTRMESAREKHFAGQEQKSRIVHEIKQIEATISGLQEKIDSSRKQESSLQADRLPLE
DDIRRLKGEGNSLTAEFEGKRRQHMQIASLARNKDDLARFGDGMSHICDQISRNQRRFHR
VPIGPIGQFVNIQDESWAAAVEIAIGFNSLRGFIVMDSHDAKVLEGLLPRGGHRPSITIA
DVGRDRYAVGREDMPDVSSYGHKTILETVEIRHNAVFNLLLDQSHIERQVLSATEDDVTQ
LGWSRIPNMKMVWNKRCDRAYSRNGSNVFRNGHRPIARILTKDMRPYLKSLDEELNNLKR
ELSTHKASVQDAEVRLRDLDSSVRSVRLEIDRCEKQIADLSRRRTTLEDQLSQAENAFDP
TPFEQEISGYEAQMQESEASRSRALSEIVALEDAHVKASDEASEASKALRQANETTQEAS
SKLEVVHDQMARVKSKSRQRRTEHIQAQDKVSRAHQEIDSQKGKVAETMVQARNTGDCPE
NIDPSVKSSSAWGRYLTTQKRRLETEQERRGGRTAGEIELDYLESKKKHDENVQFRERVK
YYVKMLKRGTNYREDLLIKLHSSLKKMVKANFRRFLSTRGHSGSISFGKSTGGVPTLRLS
TEMGTHQKVDGERHRTDDLRTLSGGEKSYTTLCFILALAEICQTPIRVMDEIDVFQDEAS
RHASFTTITQFCTQYLSNRQIIIITPLALPNFTSNESVRVVRLPDPLRQEGRGRQTIMDT
FMGESNE
NT seq
3624 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgtcgcggtcgctcccaggacgacctagaatcgaagctgccaaagcgcgctcgc
cttgacctgtcctatgcagatgatgaggacgaagacagaatcgaacccgcgcccccccgc
gcgaagcgcgggcgacaaagtcgtcaactgccacagaatgaggacgaggatgacatcaag
agcgtttctcagcagggaaatgccacttcatatgcatacggaagccgtccctctacgcag
cgaggcggcgcgagggtggttccgtctgatggcgagggtgacgaagggacagatgctgat
gatggtaatgacgatgacgaagaggacgaagaaactgttcagcagcagattcgtttaagc
acagagaaaggatttgcgcactcgggcatcttacattcggttcgtcttgacaggtttatg
agccatacttgctttgaatatatgttgggacctaatatgaacatcatcaatgggaaaaac
ggttcgggcaagagtgccatcgttgctgcgctgcaagttggtctcaatgggaaagtgggc
atcacggagagggcaaagaaattggaagagcttatcaagcacggtgaggatagcgcaatc
atcaccatcaagctcctcaaccgcaagccaccacagactgaaaacggtgtcgttgaagca
gacctcacgtacaagcatgatgtctacggtgatatcatcaccattgaacgccgtatcaca
aagggtacctccccgaactcgtttgcggtgaaggccaagaataagcatgtcaagcttgaa
gagggtgtcacgaccaagcaagaagtccagaacatctgtgaccacttcggaatcatggta
gaaaatccagtcgccatcctcacgcaaaccaagagcaaggagtttcttgcgaagggcaag
cctgagcagcatttcaaactattccagaaagcgacattgcttggtccacttcaagatgag
ctcatgaacaccaaaattatcaccaaacaagtggacagcatgctgaagagtaacgtggaa
aaggctcctgaagcggaagagaaggtgcgcaagaaggaggaggcccaccagcaagctcaa
gagatgatgaatattgatcaaataatccgccaagctgaatcagcattcgcatggacattg
ctgcaggaagaagaaatcaagctgcacaagtatgagactaaaactgctcaagagttcgaa
cctgaggcggaagctgcacgcgtggctctcgaaaaattgcaaactaagcttgatggcctt
aaaaatgaacagatagaacacaacgaaaagctacaggaggcgacggaacgatcatcgcat
ctgtcagtttcatgtcgcgatttcaagagaaaggcccagactattaagttcgatatagag
cgtcaacgacgaagaatccaagagtttgaggctgacagggataaataccgacgagatatc
agcaatgcgaacacccggatggagtctgcccgtgagaagcactttgccggacaggagcaa
aagtctcgcattgtgcatgaaataaaacaaatagaagcaacaataagtggtctgcaggaa
aagatcgattcaagccgaaagcaggaatcgtccctacaagcagacagattgccactcgag
gatgacattcgtcgcttgaaaggcgaaggcaactcactgacggcggaatttgaaggaaag
cgaaggcagcacatgcagattgcttcccttgcgcggaacaaagatgacctggcgaggttc
ggagatgggatgtcacatatatgcgaccagatctcacgcaatcaacgtaggtttcaccgg
gttccaatcggaccgattggccagtttgtgaatatacaggatgagtcttgggcggctgct
gtagaaattgctattggcttcaacagtctccgaggctttatcgtcatggattcccatgat
gccaaggtcctagaagggcttctccctagaggtggacacagacccagcattaccatcgcg
gatgtaggacgggatcgctatgctgttggtcgagaagacatgccagacgtgtcatcttac
ggtcacaaaacgattcttgaaactgtggaaattcgacacaacgctgttttcaaccttctc
ctcgaccagagccacattgaacgtcaagtgctcagtgcgacggaagatgatgttacccag
ctgggatggagtcgtatcccaaatatgaagatggtctggaacaagcgatgcgacagggct
tactcaagaaatggttcaaacgtatttcgcaacgggcatcgcccaattgcaaggattctc
acaaaggatatgaggccatatttaaagagcttggacgaggaattgaacaaccttaaacga
gagctgagtactcacaaggcatcagtgcaggacgcagaagtcagactgcgtgatcttgac
tcttctgtgcgcagcgtacgtttggaaattgatcgctgcgaaaagcagatagccgatctc
agtcggagaaggactacccttgaggaccaattgagccaagctgaaaacgcattcgatcct
acgccctttgagcaagagatctccgggtacgaagctcagatgcaggagagtgaagcaagt
cgttctcgagcgttatcggaaattgttgcactagaggacgcgcatgtcaaggcttcggat
gaagccagcgaagcttcaaaagcattgcgccaagcgaacgaaaccacacaagaagcaagc
agcaagctggaggtcgttcatgatcaaatggcccgagtgaaatctaaaagccgtcagcgc
cgcacagagcacatccaggctcaagacaaagtctctagggcccaccaagagatcgattct
cagaagggcaaggtggccgaaaccatggtacaggcgcgaaatactggggattgccctgag
aatatcgacccaagtgtcaaatcgtctagcgcatggggtcgatatctcacaacccagaaa
cgaagattggaaacagaacaagagcgacgcggagggcgcacagcgggtgaaatagaactt
gactaccttgagtcaaagaagaagcacgatgaaaacgtccagttccgcgaacgagtgaaa
tactatgtcaagatgctcaaacgtggcacgaactacagagaagatcttcttatcaaactt
cacagcagtctgaagaaaatggtcaaagccaacttcaggaggttcttgagtacccgtggg
cactcgggatcaatttcatttgggaagtcgacgggaggtgttccaacactgcggttaagc
acggagatgggtacgcatcaaaaagtagatggagagagacatcgcactgatgacctacgt
acgctaagcggtggagagaagagctacacaactctttgctttatcctggcgttggcagag
atatgtcaaactcctattcgcgtcatggatgaaatcgatgtgtttcaggatgaggctagt
cggcacgcttcatttacaacgatcacacagttttgcacacaatacctctcaaatcggcag
atcattattatcactccactggcgctgccgaatttcacatcgaatgaatctgtccgtgtt
gtgaggctccccgatcctctacgacaagaaggcagagggcgccagacgatcatggacacc
ttcatgggggaatccaacgagtag
DBGET
integrated database retrieval system
