Chondrus crispus (carragheen): CHC_T00000240001
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Entry
CHC_T00000240001 CDS
T02916
Name
(RefSeq) hypothetical protein
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
ccp
Chondrus crispus (carragheen)
Brite
KEGG Orthology (KO) [BR:
ccp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ccp03016
]
CHC_T00000240001
Enzymes [BR:
ccp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
CHC_T00000240001
Transfer RNA biogenesis [BR:
ccp03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
CHC_T00000240001
Prokaryotic type
CHC_T00000240001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Motif
Other DBs
NCBI-GeneID:
17327005
NCBI-ProteinID:
XP_005719287
UniProt:
R7QPG2
LinkDB
All DBs
AA seq
505 aa
AA seq
DB search
MIVMPQSERDNAEPSMFLVDAGENTDDQLIRCDWCMTHGFRWIRAIFITHLHGDHIYGLP
ALLINIGRFAQHRRRLATESGEEMAEPVIQIFGPYGTRGFLRTSLYWTNPVGVQFSVAEL
VPRPTDFIHLRKFSERYETKKTFIVEREDDGELNVSSERVLDLSKQSPPPHPEEVRTEDV
CVSSDGLWHLWMEGDQGVKVEVVAAPLRHRLPCFGYVFRERFEANRVDEKPAETALRSTN
HTVGVARSQSNGAAVNGAKSLDTLEIDKVKAKELGVHGTQLRVLRSGRSITVTKTGLVVH
PHDVLQTSPEKKQGTVQTPKFSDALDKKSSGRFRRKVTVLGDTCDSTLIQDAAMDSDLLV
HEATFTQALRGKAKVSMHSTARMAGAFGRQIKARKVALTHFSSRLEMLHGGDDPSENGTE
GNGSVNGKPYGDGVLDEENDEEEDLVSPNLLVREALQGYGRGQGNIVAAKDFMEHDIIPF
DSNEENEGKVVGESYKINAAASQAV
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgatcgtaatgccccagagcgaaagggacaatgccgagccctcaatgtttctcgtggac
gctggcgagaacaccgacgaccaactcattcgatgcgactggtgtatgactcacggattt
cgatggattcgtgcaatatttattactcacttacatggggaccatatttatgggctgccg
gccttactcataaacattggacgattcgcgcagcaccggagacgtctagcaacggagagt
ggcgaggagatggcggaaccggtcattcaaatattcggaccttacgggacgcggggcttt
ctgcgaacttctttgtattggacgaatcctgtcggagttcagttttccgtcgctgagctc
gtgcccaggcccactgactttattcacttacgcaagttttcagaacgatatgagaccaaa
aaaacatttattgtggaacgcgaggatgatggagagctcaatgtgagctcggaacgagta
ctggacttatcaaagcagtctcctcctcctcatcctgaagaagtacgaacggaggatgtt
tgtgtgagctcggacggactctggcacctgtggatggagggggaccaaggcgtgaaagtc
gaggtggttgcggctccattgcggcatcgactgccctgttttgggtatgtcttccgcgaa
cgattcgaagcaaacagggtggatgagaagcccgcagagactgcattgagaagcacaaac
cacaccgttggtgtggcacgcagtcaatcgaatggtgcggctgtgaatggcgccaaatct
ctagatacgcttgaaatcgacaaggtaaaggcaaaagagcttggcgtgcacggaacacag
ctgcgtgtcctccgatccgggcgttcaattacggtgacaaaaacggggctcgtcgttcat
cctcatgatgtgctgcagacctcaccagaaaaaaaacagggcactgtgcaaacgccaaaa
ttctctgatgctttggacaagaagagtagcggaagattcagacggaaagtgactgtgtta
ggggatacgtgtgactcgacgttgattcaggacgctgcgatggactcggacttgctcgtg
catgaggcgactttcacacaagcgctgaggggcaaagctaaggtatcgatgcacagtact
gctcggatggccggggcatttgggcgacagatcaaagcgagaaaggtagcgcttactcat
ttctctagccgtcttgagatgctacacggcggggacgatccaagcgagaatggcacggaa
gggaacgggagcgtaaatggtaaaccttacggtgacggagtgcttgatgaggagaatgac
gaagaagaggacttggtgagcccaaatcttctagtgcgagaggctttacagggatatgga
cgaggccaaggcaatattgttgctgcaaaggattttatggagcacgacattattcccttc
gattccaatgaagagaatgaaggaaaggtggtaggcgagtcatacaagattaatgctgcg
gcgtcgcaagctgtttga
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