Chondrus crispus (carragheen): CHC_T00000519001
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Entry
CHC_T00000519001 CDS
T02916
Name
(RefSeq) hypothetical protein
KO
K07179
RIO kinase 2 [EC:
2.7.11.1
]
Organism
ccp
Chondrus crispus (carragheen)
Pathway
ccp03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ccp00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
CHC_T00000519001
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
ccp01001
]
CHC_T00000519001
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ccp03009
]
CHC_T00000519001
Enzymes [BR:
ccp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
CHC_T00000519001
Protein kinases [BR:
ccp01001
]
Serine/threonine kinases: Other
RIO family [OT]
CHC_T00000519001
Ribosome biogenesis [BR:
ccp03009
]
Eukaryotic type
Pre-40S particles
Kinases
CHC_T00000519001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RIO1
Rio2_N
ABC1
APH
TCAD9
Pkinase
OspG_kinase
Choline_kinase
PK_Tyr_Ser-Thr
Motif
Other DBs
NCBI-GeneID:
17325625
NCBI-ProteinID:
XP_005717892
UniProt:
R7QJX4
LinkDB
All DBs
AA seq
455 aa
AA seq
DB search
MKLDPSALRYLSDDDFRVLTAIEMGMRNHELVPIPLISAISGLRHGGYMKSLKEVHKNKL
VHKETKRYVGYRLTSMGYDYLALRALVKRGVIEAVGRAIGVGKEADVFIVSASEALMDEL
PDLSDTPHLAMKIHRLGRTSFRAVKQKRDYLVHRKSASWIYFSRLAATKEYAFMCALHER
GFAIPRPLGQSRHVVVMELCSGVPLTQVSELGDPVAIANKLLKFAVRLAQHGLVHCDLNE
FNIMIDDDENITVIDFPQMVSTCHVDAEELFDRDINGILRFFVHRFGVVETDLTRPKLSA
ILAERGDEDQLDAMVAASGFKNIANEDQYGEQDLGGEVDGEDEEVFENIDMRSLQLSVPQ
EDFTDHEGAPAAGCIPNSSERVSGDDAGVEENLEVESRAGFDKPQPGMEINRALIESRVR
RQRGNQSQRRQMARRNVVKDSEKRKIKVEMSSDFW
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgaagttagacccatccgcgctgcgctacctcagcgacgatgacttccgagtcctgacg
gccattgagatgggaatgcgcaaccacgagctggtccccatcccgctcatcagcgccatt
tccggccttcgtcatggcggctacatgaagtcgctgaaggaggtgcacaaaaacaagctc
gttcacaaggagacaaagcgctacgtcggataccgcctgactagcatgggctacgattac
ctcgcgcttcgcgccctcgtcaaacgcggcgtcatcgaagccgtcggccgcgccataggc
gtagggaaggaggccgacgttttcatagtctccgcctccgaggccctcatggacgagctc
ccagatctttccgacacgccgcatctcgccatgaaaatccaccgactgggccgcacctcg
tttcgcgccgtcaagcagaagagggattacttggtccatcggaagtcggcctcgtggata
tatttttctagactagccgcgacgaaggagtacgcctttatgtgcgccttgcatgagagg
ggctttgccattccaaggccgcttggccagtccaggcacgtcgtcgttatggagctgtgc
agcggcgtcccgctgacccaggtgtccgaacttggcgacccggtggcaatcgccaataag
cttctgaagtttgcggtgagactagcccagcacggcttggtccactgcgatttgaacgaa
tttaatatcatgattgatgacgacgaaaatatcactgtcatcgattttcctcagatggtg
tccacatgtcatgtcgacgcggaggagttgtttgatcgcgacatcaacggaatccttcgt
ttcttcgtgcaccgcttcggagtcgtagaaacagaccttacgcgtccgaaattgagcgca
atccttgcggaaagaggagatgaagaccaactcgatgcgatggtcgccgccagtggtttt
aaaaatattgcgaatgaagaccagtacggtgagcaggatttaggtggcgaggtggacggc
gaggacgaagaagtcttcgaaaacatagacatgcggagcttacagttgtccgtccctcag
gaagatttcactgatcacgaaggggctccagccgcgggttgcatcccaaattcctcagaa
cgggtgagcggggacgatgctggtgtggaagaaaatttggaagtggaatccagggcaggt
tttgacaagcctcaaccgggaatggaaatcaaccgcgctctgatcgagtcccgagtccgc
cgacaaagaggaaatcaatcacagcggcgtcaaatggcaagaagaaacgttgtcaaagac
tcagagaagcgaaaaatcaaggtggagatgtcatctgacttttggtag
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