Chondrus crispus (carragheen): CHC_T00001253001
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Entry
CHC_T00001253001 CDS
T02916
Name
(RefSeq) hypothetical protein
KO
K14440
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 [EC:5.6.2.-]
Organism
ccp
Chondrus crispus (carragheen)
Brite
KEGG Orthology (KO) [BR:
ccp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccp03036
]
CHC_T00001253001
Chromosome and associated proteins [BR:
ccp03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
CHC_T00001253001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
Zn_ribbon_GRF
DEAD
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
17326545
NCBI-ProteinID:
XP_005718828
UniProt:
R7QMC9
LinkDB
All DBs
AA seq
923 aa
AA seq
DB search
MTSTGAGSTGEKCDVHGVWTEEITVKPVGLQPGRRYLRCSLPLPQRCQFFRLLETIQNRA
PRQDFRRSSVEMPGRSAPFFQHEKDARSRNGPSSRLNQATSLGSRQTSIGGFRIGSSRGV
DDRRSRPSSAGNTSIMGEEAAAEKCRCGNDAVKRTVRKEGPNKGKNFWVCRKPHGEQCGW
FEWAVAPASPHRDTRKRPHSRYREDSFGQQGGSNETSTDISRAERIHEPAEKRARHAPQH
SVSITLEDIDHVSFTITTNGPAELKEALQNYEHAKVKKTNFLGVEKVTIPIENTFSCEAY
VEASVRTQFEYGTPREIICRIIEYRAAENKREEQGGIFTQSLEGVLPEIMCEKLMEFQWE
GIHFALKRGGRCLFGDDMGLGKTLQAIAVARVYMNDWPLLIVCPSSLRLNWKEELLKWLD
HDLDEEDILVIMTGRDIDRPLERVNIVSYDLLRKIPPAFLRRCQFIIADESHYLKSMTAK
RSQALTPLIKGAKRALLLSGTPALSRPVELFPQINAISPLLFPLYQEYVERYCAAHVGRF
GYDVSGASNLDELHTMLRGSLLIRRKKEEVLSQLPDKQRQVLWVQTKAKAMKEVESAMVK
MEKLKDEARNPSSEGRARALNFDIKAAQNELYKLTAFAKIESVKEFCKDTAETGCKFIVF
LHHKEVMTQLNEFVTSKLKLGRICIDGSTPQGNRQNLCRQFQEDPKCRVALLSITAAGVG
LTLTKATVVLFAELYWNPGSLLQAEDRAHRIGQKDCVLVKYLLARKTIDESMWSTIRRKL
TVVGHSLTGTAARMELTEDKDAGDPKQKDISSFFKAKTKSASLKICSTTQLTEVVEIDDE
EDETPQATAQNGDKDNSLPDEDNMFPASLRDMQKPPLHAEVLHVPDDFGDMDLKAARARQ
AQLDADIAFARKLQAQFDAEEAL
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atgacgtccaccggagctgggtctacaggagagaagtgcgatgtgcacggcgtctggact
gaagagatcactgtgaaaccagtcggcttgcagcctggtcgtcgctatcttcggtgctct
ctacctctcccacagcgctgtcaattctttcgattactagagaccatacaaaatagagcg
ccacgacaggactttcgtcgatcctcagttgaaatgccgggacgcagtgctcctttcttt
caacatgagaaagatgcaagatcacggaatgggccctctagcaggctaaatcaggcgact
tctttaggttcacgacaaacgtcgataggcggtttccggatcggtagctcgcgaggagtt
gacgaccgtagatcgcggccttcatcagctgggaatacatcaatcatgggtgaggaggcc
gccgctgagaaatgcagatgcggaaatgacgcggtgaagaggacagtgcggaaggaaggg
ccgaacaagggcaagaatttttgggtttgtcgtaaaccccatggcgagcaatgcgggtgg
tttgaatgggctgttgctcccgcctctccacaccgggacacacgaaaaagaccacattca
agatacagggaagattcttttggccagcagggggggtcaaatgaaacctcaactgatatc
tctagagctgaacggatacacgagccggctgagaaaagagctagacatgctcctcaacat
tcagtgtccatcacgcttgaagacattgaccatgtgtctttcacgattaccacgaacggc
cccgccgaattgaaggaagctctgcagaactatgagcacgccaaggtcaagaagaccaat
tttctgggagtagaaaaggtaacgattcctatcgaaaacaccttctcgtgcgaggcatat
gtcgaagcgagcgttaggacgcagtttgaatatggcactcctcgagaaatcatctgtcgg
attatcgaatatcgcgccgcggagaataagagggaagagcaaggtggtattttcacgcaa
tcactcgagggcgtccttccagagattatgtgtgaaaagctgatggagtttcagtgggag
ggcatccattttgctctgaagcgggggggccgttgtctgtttggggatgacatgggtctc
gggaaaactcttcaggccattgcggtggccagggtgtacatgaatgattggccactcctg
attgtatgcccgagctcacttcgtctgaactggaaggaagagttgttaaaatggctggat
catgatcttgatgaagaggacattctggtcatcatgaccggcagagatatcgacaggcct
cttgagcgtgtgaatatcgtttcttatgatctccttcgtaagattccgcctgcgtttctg
cgtcgttgccagtttataattgctgacgaatctcactatctgaaatccatgactgcgaaa
cggtctcaagctctaacacctcttatcaagggggcaaagcgtgcattgcttctgtcgggt
acacctgctttatctcgtccagtagagctcttccctcaaatcaacgctatttccccactt
ctgtttccgctctaccaagagtacgtggagcgatattgtgcagcacacgtcggtcggttt
ggatatgacgtttcaggggcatccaatctcgatgaattacacactatgctgcgcggtagt
ctcttgataagacggaagaaggaagaggtactctctcagctcccggacaaacagcgtcag
gtcctttgggtacaaaccaaggcaaaggcgatgaaggaagttgagagtgcgatggtcaaa
atggagaaactcaaggacgaagcccgaaacccatcatcggaggggcgtgccagggctttg
aattttgacatcaaggctgcacagaatgagctatacaagctgacggcattcgcaaagatt
gaatctgttaaagagttctgcaaggatactgcagaaactggttgcaaattcattgtgttt
cttcatcacaaggaagtcatgacgcagctgaacgaattcgttacatccaaattgaaacta
gggcgcatttgcatagacggaagcacaccacagggcaatcggcagaatctctgccgtcag
tttcaagaggacccaaaatgtcgtgttgcactcttatccatcacagctgcaggtgtggga
ctaactctgacaaaggccacagttgtgcttttcgccgaattgtactggaatcccggaagt
ctgttgcaagctgaggatcgcgcccatcgcattggtcaaaaggactgcgtgctagtgaag
tacttacttgctcggaaaacaatagacgagtctatgtggtcgacgatacgcagaaaactg
actgttgttggtcattctttgacagggactgccgcgcgcatggaactgactgaggacaaa
gatgccggtgacccgaagcaaaaggacatatcgagctttttcaaagcgaaaacaaagtct
gcctctttgaaaatatgtagtactactcagctgaccgaagtcgtcgagatagacgatgag
gaggatgaaacgccgcaagccacagcgcaaaatggggacaaggataactcgttgccagat
gaagataacatgtttccagcatctctacgagatatgcaaaaaccaccattgcatgcggaa
gtacttcacgtacctgacgatttcggcgatatggatctaaaggccgcgagggcgaggcaa
gcacaactagacgcagacattgcctttgctcgaaagctccaggctcagtttgatgcggag
gaagccttgtaa
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