Chondrus crispus (carragheen): CHC_T00001336001
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Entry
CHC_T00001336001 CDS
T02916
Name
(RefSeq) hypothetical protein
KO
K02434
aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:
6.3.5.6
6.3.5.7
]
Organism
ccp
Chondrus crispus (carragheen)
Pathway
ccp00970
Aminoacyl-tRNA biosynthesis
ccp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ccp00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
CHC_T00001336001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
ccp03029
]
CHC_T00001336001
Enzymes [BR:
ccp01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.6 asparaginyl-tRNA synthase (glutamine-hydrolysing)
CHC_T00001336001
6.3.5.7 glutaminyl-tRNA synthase (glutamine-hydrolysing)
CHC_T00001336001
Mitochondrial biogenesis [BR:
ccp03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
CHC_T00001336001
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GatB_N
GatB_Yqey
WHD_BrxR
Motif
Other DBs
NCBI-GeneID:
17319566
NCBI-ProteinID:
XP_005711756
UniProt:
R7Q427
LinkDB
All DBs
AA seq
611 aa
AA seq
DB search
MCFSLQSSVAFIHWSHSLNLRSSICATNKVCTTTMTKRTISTTMAGFVAPSMLSVIPRCT
RAHTTFRGLRISRRSYRTSFSVSPTPPLSVLSMVTTEKKIGGKKESQAKGKSGKRVKKGS
SSPGLLRALEKYEPVIGIEFHVQLATKTKAYCSCSTKTPRTPNVNVCPVCMGHPGALPVV
NSKVVELAAKAGMALGCDISSYSRYDRKNYYYVDTAKNYQITQDLFPIATKGSVQLPNSG
GVIGVTRLHMEEDSAKMSHEGADASGRLTDSTHSLVDFNRSGIPLVEIVSEPDIRSGLEA
AEYGQEVQRILRYVGTSNCNMQDGSMRCDVNVSLRLKGTKKFGTKIELKNLNSFSAAHKS
IDFEIERQAEILDRGETLQMETRTWDEKTNETRTMRVKEGAADYRYFPEPDIPPLNLSDS
QLQTWRDTLPELPNEKRVKYQEEFGLSGYDAFLLSDDTQVAKYFEDSIAAGAKPKQAANL
IMGDITKVLKSEKIGIKLCKLTAEGLAEMIGMIDGGVISNKIAKDLVPELVIKGGNPAQI
VEERDLKLISDPDVIRKIIEGVVDANPKELESYKQGKTRLLGFFVGKTLSASGSKADPTT
TNKILKEILDS
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgtgtttttctttgcaatcttctgtagcgttcattcattggtcccattccttgaatctc
cgatcttcaatttgtgcaacaaacaaagtgtgcacgaccacgatgaccaagcgaacgatt
tcgacaaccatggcaggtttcgtcgccccatccatgctgtctgtgataccacgctgcacc
cgtgcacacacaacatttcgtggtctcagaatttcacgtcgctcttatagaacctccttc
agtgtgtcacctacgccaccactctccgtcttatccatggtaacgacagaaaagaagata
ggtggcaaaaaagaatcgcaagccaaaggaaagagtgggaagagggttaagaagggctcc
tcttctcccggacttctcagggcactagagaagtacgaaccagtcattggcattgagttt
catgtccagctagccaccaagacgaaagcttattgcagctgctccacgaaaacccctcgc
acacccaatgtcaacgtttgtccagtttgcatggggcatccaggtgcactcccggttgtg
aattcgaaggtggttgaacttgctgcgaaggctggaatggctctaggatgcgatatttcc
agttattctcggtacgatcgcaaaaactactattacgtcgataccgccaaaaactatcag
attacgcaagacttgtttccgatagcaacgaaaggctcagtccagcttccaaattccgga
ggagtcatcggcgtcactcgcctacatatggaagaagactcggccaagatgtcacatgaa
ggagccgatgcgtctgggagactcactgactctacccattccctggtcgatttcaatcgt
agcggcattcctctcgttgaaatcgtcagcgaacctgatattcgaagtggcttggaagcc
gccgagtatggacaggaagtccagcgcattcttcgctatgttgggacgagcaattgcaac
atgcaagatggtagtatgagatgtgacgtcaatgtatcccttcgtctcaagggcacaaaa
aagtttggaacgaaaattgagctcaagaatctcaattcgttttccgcagcccataaatca
atagactttgagattgaacgacaagctgaaattcttgacagaggggaaacgctgcaaatg
gagacaagaacgtgggatgagaaaaccaatgagacccggacaatgcgagtcaaggaaggc
gcagcagactacagatacttcccagagccagatattccacccttgaacctgagcgactcg
caactacaaacttggcgagatactttgcctgagcttcccaacgagaagagagtgaaatat
caggaagaattcggactgtctgggtacgacgctttcttactctctgacgacacacaggtt
gcgaaatatttcgaggattcgattgcagctggagcaaagccgaagcaagcggccaatttg
atcatgggcgacattacaaaagtcttgaagtctgaaaaaataggaatcaagctttgtaag
cttacggctgaaggtcttgctgaaatgattggcatgattgacggcggtgtcatcagtaac
aagatcgccaaggaccttgtaccggaacttgtcatcaaaggaggcaatcctgcgcaaatc
gttgaagaaagagatctcaaactaatatccgatccggatgttataagaaaaatcatcgaa
ggcgtagttgatgcaaatccaaaagagttagagtcttataagcaggggaaaacaaggctc
ctcggcttctttgtcggaaagacactgtctgcttctggcagcaaagcagaccctacgact
accaacaaaatcctgaaggagattctggattcatga
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