Chondrus crispus (carragheen): CHC_T00001380001 Help Entry CHC_T00001380001  CDS       T02916                                  Name (RefSeq) hypothetical protein   KO K11649   SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C Organism ccp  Chondrus crispus (carragheen) Pathway ccp03082   ATP-dependent chromatin remodeling Brite KEGG Orthology (KO) [BR:ccp00001]  09120 Genetic Information Processing   09126 Chromosome    03082 ATP-dependent chromatin remodeling     CHC_T00001380001  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:ccp03021]     CHC_T00001380001    03036 Chromosome and associated proteins [BR:ccp03036]     CHC_T00001380001 Transcription machinery [BR:ccp03021]  Eukaryotic type   RNA polymerase II system    Coactivators     BAF/PBAF complex      CHC_T00001380001 Chromosome and associated proteins [BR:ccp03036]  Eukaryotic type   Chromatin remodeling factors    BAF complex     CHC_T00001380001    PBAF complex     CHC_T00001380001    GBAF(ncBAF) complex     CHC_T00001380001 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  SWIRM SWIRM-assoc_1 SWIRM-assoc_2 Myb_DNA-binding ZZ Myb_DNA-bind_6 TMEM106_N C1_2 Chromo UPF0167 OmpH Motif Other DBs NCBI-GeneID:  17319577 NCBI-ProteinID:  XP_005711816 UniProt:  R7Q481 LinkDB All DBs AA seq 1311 aa AA seqDB search MTSNSKPTVRPKSATVNTREYDEAAMHKRFIPMNDAIHARSESELGFNPVDVTVRSLSLL TGNLRQFVESALGRDASSQWKKITKFPHHLFFDYSPSGALDIMLCACLNFKALHGLRRLE FSNIDKRDFYMDLLRRIHRNLLQAGLIPAIKVFLASNVDSAHHAVLRAIVQKRGLMVGTA ASATHIVYPDPDGTAAEETEGTDYCRALQYRENAALVHWWYYPDSYDSWISREDVDGPPE PPEVHKGPWHVQTRWLHDSEMFNEWMNETDYEIPDDSRMAVTSVPTAVKDKSEPEKAPRK RKRLPTTSSSNHQTDPAQVPRASRLGVEASSKADSSDDSDDEAVRKPKRHSESARERKRK EPGNHSKSGDGGARKRARTAEGTEQKSGSSIQVRLPLKPPHDRPRHRSRDRHRDRKGEGT RAEGREGRMELKEGNLRVKLPKFGDAKRTGDPDRKSSSKDAQRNSPNENASSANRLPTSR GIEERSSTGGKAKDIGKAGPSALPPKPDQKANGGENIAGEQGGQEQKRPFSRRRSKKKER RSHSRMSGVSVVDDAVPIPEGDVPRIRNISTEGGSAMSPNAASGSEAGEGEIDAGDKKDT DEVSAKPKGKVSTVAEEAMDVDSGDGNGRIMALSEKMLSGDRANDPVSTADVVEALPPVT VRIPPQSRWFRMDAVHDIERRSLPEFWNSRGESKTPLVYKKYRDFMIDVWRQSPDKHLTA TAARRHLAGDVSAILRVHAFLEYWGLINYGTEPESRPFLNSALLPRRSRPTPMQLDSNVA APATGVPRLLFFDEPRPPRRDNGPVSLQKAVKAAKEKGTRARSHVLSRRELYSTAAATKY ECDACGKDCSRMRYHCVANADMELCPTCFANGMYPAIFSARDFEQLTTVLASEAYDGSVW SEAEVLLLLEGLEKHGDNWNQVAEHVGTKGTEQCVLQFLRIPLEDSFLEDQVGNWTMGED GEEGVDDVKDTNASGKHHFSGPLLPFYDTANPIMAQVAFLASSVDPEVAAAAAQAALNAI TSQSGPKSPKQENRTAQAKALLMNPAQQKRSSTENGFSPNAGTARGTEMSSLPGKQLDSV AVESVAAVGLAAAASKALHKAQAEMREIERRYAVAIETKMRAVDLKVKEFERLNQHLRRE RERLEKQRQRVFADRVDAIAMRIQSEAQSRAMTMQSSAAVVHPVASMPQLQPQGTLGSLR PPPGISGIPMHHGRPGLQHSQLPMQQMQLPMHQNQTPLQQGQLLISHTQLQLPQGQGIAQ HPQAPVQQRTSPLPPGAVSAQLDASALQAGTAQAQHQAGMIRPHTDGGPNK NT seq 3936 nt NT seq  +upstreamnt  +downstreamnt atgacgagcaactcaaagccgactgtgcggccgaaatcggccacggtcaatacgcgcgag tatgatgaggccgccatgcacaagcgcttcatccccatgaacgacgccatccatgcccgt tccgaaagcgagttgggcttcaacccggtcgatgtcaccgtgcgctcgctctccttgctt actggcaacctgcgccagtttgtcgagtcggctttgggacgcgatgcaagttcccagtgg aagaagatcacaaagtttccgcaccacctcttttttgattactccccgagtggcgccctc gacatcatgctatgcgcttgtctgaacttcaaggcattacacgggctgaggagactcgag ttttcgaatatcgacaagcgcgacttttacatggacctcctgcgcagaatccacaggaat ttgctccaggctggcctgattccggcaatcaaggtttttctcgcatccaatgtggactct gctcatcacgccgtgctacgtgcaattgtgcagaagcgaggcctgatggtggggactgct gccagcgcaacgcacatcgtttacccggatccagatggcacagcagcagaagaaacggaa ggcactgactactgccgagctttgcaatatagggaaaatgctgccctggtgcattggtgg tactaccccgattcttacgactcatggatctctcgagaggacgtcgacggcccaccggag ccgcctgaggttcataaagggccttggcatgtccagaccagatggctgcatgattcggaa atgttcaatgaatggatgaacgagaccgattacgagatacctgacgacagtcgcatggca gtcacgtcagtgccgacagctgtcaaagacaaatctgaaccggaaaaagcaccaaggaag agaaaacgtcttcccactacctcttcctcgaatcatcaaaccgatcccgcgcaggtccct cgagctagtcgcctcggtgttgaggcatcgagcaaggcagactcgtcagatgactccgat gacgaggccgttcggaaaccaaagcggcatagcgagtcagcgcgcgaacgcaagagaaaa gaaccaggtaaccacagcaagtcgggagacggtggcgccagaaaaagggctagaactgca gaaggtacggagcagaaatctggttccagcattcaggtacggctgccgctgaagccacca catgatagaccaagacatcgctccagggaccgccacagagatcgaaagggggaaggcacc cgggcggagggccgggaaggcaggatggaattgaaggaaggtaacctgcgagtgaaatta ccgaagtttggagatgccaagcgcactggcgacccggacaggaagtcctcctcaaaggat gcgcagagaaattcccccaacgagaatgcgtccagcgcgaaccggttaccaacttctcgg ggaatcgaagagagaagctctactggcggtaaggcaaaggatatcggtaaagcagggcca tctgcattacctccaaagcctgaccagaaagcaaatgggggcgaaaatatcgcaggagaa caaggagggcaggagcaaaagagaccattcagcagacgacgcagcaagaaaaaagagcgt cgatcccatagccgtatgtcgggcgtatctgtggtggatgacgccgtcccaatcccggaa ggtgatgtaccccggatacgcaatatttccactgaaggcgggagcgcaatgtctccgaat gctgcatctggatctgaagctggagaaggagaaattgatgctggtgacaagaaggacact gatgaagtatcagccaaaccaaaggggaaggtgagcaccgttgctgaagaagctatggat gtggattcaggtgatggcaatgggaggataatggctctatctgaaaagatgctatcaggt gaccgagccaacgaccccgtgtcaacagctgatgttgtggaggcccttcctccagttacg gttagaattcctcctcagagccgatggttccgaatggatgctgttcatgacatagaaaga aggtccttaccggaattttggaacagtcgaggagagtctaaaaccccgctagtctacaaa aaataccgagactttatgattgacgtctggaggcagtcgcctgacaagcacctaactgcc acagctgcacgtcgtcacttggccggggatgtgtctgcaatcctgagggtacatgcattt ttggagtattggggcctgatcaactacggaacagagcctgagagtaggccgtttctgaac tcggctcttctaccacgtcgttctcgcccaacgccgatgcagctggactcaaatgtagct gcacccgcgactggcgttccaagacttctgttctttgacgaaccccgccctccccgccgt gacaacggcccagtgtctctacaaaaggctgtcaaggctgcgaaggaaaaagggacgagg gctagaagtcacgtgctctcccgccgtgaattatattcaaccgcagctgctacgaagtac gaatgcgacgcatgcggtaaagactgctctcgaatgagatatcactgcgttgcaaatgca gacatggagctgtgcccaacatgttttgcgaacggcatgtaccctgcaattttctcggct agggatttcgagcaattgaccacagtacttgcctcagaagcgtatgatggttctgtgtgg agtgaggcagaggtgttattacttttagagggcctcgaaaaacatggagacaactggaat caggttgcagaacatgtcggcacgaaaggcaccgagcagtgtgtactccagttccttcga attccattagaagactccttcttggaagatcaggttgggaactggactatgggtgaggac ggtgaggagggggttgatgatgtgaaagacacgaacgcatcgggaaagcatcacttttcg ggtccccttcttcctttttacgacactgccaaccctatcatggcgcaagtagctttcttg gcgtcctcggtcgaccccgaagtagccgctgcagcggcgcaggctgcgctcaatgcaatt acgtcacagtctggaccaaaatcgccgaagcaagaaaacaggacagcccaggccaaagct cttctcatgaatcccgcacagcaaaagcgctcgtcgacagagaacggtttctctccaaat gcaggcaccgctcgtgggacggagatgagctcgttgcctggtaaacaactagactcagtt gcagtggaatcagtcgccgctgtaggacttgctgctgccgcgtccaaggctcttcacaaa gcccaagctgagatgagggaaattgaaaggcgttatgcagttgctatcgagacgaagatg cgagctgttgacttgaaagtgaaggagtttgaacgtcttaatcagcatcttaggagagaa cgcgagcgtctggagaagcaaagacagcgggtttttgcagaccgtgttgacgcaattgca atgcgcatccagagcgaagcgcagagtcgagcaatgaccatgcaatcaagtgcagctgtc gtacacccggttgcctccatgcctcaactgcaaccccagggtactctgggttccttgaga ccgcctccgggtatcagtgggataccaatgcatcacgggcgccctggtttgcagcacagt cagttgccaatgcaacaaatgcaactaccgatgcaccaaaaccaaacgccattacagcaa ggtcaactgcttatttcacacacccagctacagctaccgcaaggtcaaggtattgcgcag catccccaggccccggtgcagcagcggacatctccgttgcctcccggtgctgtttccgcg cagcttgacgcaagtgccttacaagcaggaacagctcaagcacagcaccaggcaggaatg attcgtccgcacactgatggtggtcccaacaaataa

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