Chondrus crispus (carragheen): CHC_T00001386001 Help Entry CHC_T00001386001  CDS       T02916                                  Name (RefSeq) hypothetical protein   KO K11367   chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-] Organism ccp  Chondrus crispus (carragheen) Brite KEGG Orthology (KO) [BR:ccp00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:ccp03021]     CHC_T00001386001    03036 Chromosome and associated proteins [BR:ccp03036]     CHC_T00001386001 Transcription machinery [BR:ccp03021]  Eukaryotic type   RNA polymerase II system    Coactivators     SAGA/TFTC/STAGA complex      CHC_T00001386001 Chromosome and associated proteins [BR:ccp03036]  Eukaryotic type   Histone modification proteins    HAT complexes     SAGA complex      CHC_T00001386001     SLIK complex      CHC_T00001386001 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  SNF2-rel_dom Helicase_C HTH_CHD1_Hrp3 Chromo CHD1-like_C ResIII DEAD HDA2-3 SWI2_SNF2 SLIDE CHDCT2 Motif Other DBs NCBI-GeneID:  17319519 NCBI-ProteinID:  XP_005711824 UniProt:  R7Q275 LinkDB All DBs AA seq 1553 aa AA seqDB search MKTHLVKTRRWRTASQMTATVMITRTCLFVSVHAHAAGRKLLFLRTCSTTLSIFGAHVAR DMLQNVFQFLRWTLLLRLEAVNMTSTPTMVRSPAFLHARAHTAVRHTAVYRECYKTRPVL TTFDLNFPFLIRCLITTGREDDDDEEMEDLDDDDFELQPTRKPQKRQGAGARRRQRAKAS EPEGTRFPVEYSESDSDGDWRDGPTKKLLGRRRRKKGVTRPSKRRRTRDETEDAEVARTA RINSRTGGAVNYFESDDDFLDSENEALQPGAPHAPVDDGSPRVDSVLDYRPIEKKEPANQ EEAPFSDFDPQNVEFNIKWVGKSFRKNTWEAWTTLRDMKGSKRVRNYMKSVEERQAYFRL RKASPEEEEEARILMEENRTAIKVYEVIDRIVAQRNNADDASKVEYFVKWSNLPYGQCTW ELASDLSSEADLKAIDDYRDREQSALGNSSKKRYNPFSNKEERPRLKRMLEQPSYLHGEG RTLRDYQLEGLNFLAFSWTKRNNVILADEMGLGKTLQTISFLGWLMYSRNVLGPFLVVVP LSTIAAWVREFARWLPDMNVVCYTGNAESRSMIREHEFWVSSKASTEKFHVLLTTPELLM MDHDYLHEVRWAMVAVDEAHRLKNETSALHITLASLRSANRLLITGTPLQNSVRELWALL HFLNPEIFESAEVFEESFSFAALRDPERVSSLHKTLRPYIIRRQKSDVEKSLPKKTYAVL RVGMTSAQQQYYRWLLTKNFAKLNAGNKARGMGNTQTLRNLVMELKKCCNHPFLFPNYED TSVTTSIDDLIRASGKMILLDKLLLRLREKGHRVLIFSQMVRMLDILQDYCRMRNFPCQR LDGSIANEVRQRAVDHFNAPDSNDYVFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQ AESRAHRIGQKKDVKVFRLLSRETVEEDILERAKRKRVLEHLVIHGVEGGDQGDGKDAQA AFKKEELSAILRFGAEKLFEKDKENTGDVGVDSKEKGSGEQKENGTGADAPTAQDVYDQD KDGKAEERRVLEVDDIDELLARAPTDEASQVGGAQPSVGDSLLNAFKWADFKTVETEDEA EDEGPETEIMANAAANKLIAIDAEAARAKKEEEHDKRKLEKEGDNEFWDRVIPGEMRNEA IANDMVLGTRRRKRTKTFGADSPHDGKRRRVTRGVRTVMKVTDPDELTAKEQRSLLRSLR KFGDATLITIIVKDAGLEDRIEEELGQAMITDCLDQAKAAVKTARSTGAKKKETDQDPEY NSKVNGRSTTKDSKSKASRVLIDALGETGVDAVDLLKRCDDLKMLRSHIGNFETDTQFRL RRAIKAPTYNVRWKTQNDAMLLVGVYRHGFGNWTRIAQDKQLHLADKMNVAGNTECKPGA PDTTKLTRRVTTLLREVEREVRPKPSAKKASKRDRQEGKVDKKRTPKGQKISKSRKKDGA VSRGGASSKHTKKSVPISGMGGMRKALKVSNISTLKELRSLSKENNKLDNHEKIKRTKEC LLKLGRAIERQNSSNKVQVDLWRFVHDVCHTCLPGDRLRSIYEKLADVEPSNG NT seq 4662 nt NT seq  +upstreamnt  +downstreamnt atgaagactcatctggtgaagaccaggagatggcgaacggcatcgcagatgacagccaca gtgatgatcactcgaacctgcttgttcgtaagcgtacacgctcacgccgcagggagaaaa ttgttattcctgaggacatgctcaacgactctgagtattttcggcgctcacgtcgctcgc gacatgctccagaacgtctttcaatttctccggtggactctccttcttcgattggaggca gtgaatatgacttcaacgccgacgatggtacgttcaccagcctttctgcatgctcgggct cacaccgccgtaagacatacagctgtataccgagaatgttacaagactcgtcccgtacta accacgtttgacctcaattttccttttctaatccgctgcctgataacaacaggacgtgag gacgatgacgatgaagaaatggaggacttagacgatgatgacttcgaactacaaccaacg cgaaaaccacaaaagcgacaaggggctggagctcgccgtcgccaaagagcgaaggccagt gaacctgaagggactcgatttcctgttgagtattccgaatctgattctgatggcgattgg cgtgatggccctacgaagaaactgcttggtcgccgtcgacggaaaaagggagtcacgcgc ccttccaagcgacgacgcacaagggatgaaaccgaagacgcagaggtcgcgcgaactgcg cgaatcaatagtcgaacaggaggcgctgtaaactatttcgaaagcgacgacgactttctc gactccgagaatgaggctttgcagcctggagcaccccatgctcctgtagacgatggatct cctcgggtggacagcgtcttggactaccgaccaattgaaaagaaggaaccggcgaaccag gaggaagctccattctctgacttcgatccacagaatgtggagttcaacatcaaatgggtg gggaaatcattcagaaagaacacatgggaagcatggactactttacgcgacatgaaggga tcaaagcgagtgagaaattacatgaaatcggtggaggaaagacaagcttattttcgactc cggaaagcatcaccggaagaagaagaggaggctaggatcctcatggaagagaatcgaact gctattaaggtctacgaagtgatcgatcgcatcgtcgcgcaacggaacaatgcggacgat gcctcgaaagttgaatactttgtaaaatggtctaacctgccgtatggacagtgtacgtgg gaattagcatcagatctgagctcagaagctgatctgaaagcaatcgatgactacagggac agggagcagtcagcactcggaaattcaagcaagaaaagatacaatccattcagtaacaaa gaagaaagaccccgcctgaagcgaatgctagagcagccatcttatttgcacggggaaggt cgaacattgcgtgactatcaattggaggggctaaacttcttggcattctcatggactaag cgaaacaacgtaattcttgccgatgaaatgggcctgggtaagacattgcaaacgatatca ttccttggatggctgatgtactctcgcaatgttctggggccgtttcttgtcgtcgtgccc ctcagcacaattgcggcgtgggttcgggagttcgcgcgctggttaccggacatgaatgta gtatgctacacaggcaatgccgagtcacgatctatgatacgtgaacatgaattctgggtc tcgagcaaagcgtcaacagagaagtttcatgttcttcttacgacaccggaactactcatg atggatcacgactacctacacgaggtgaggtgggccatggttgcagttgatgaggcgcat cggcttaagaacgagacgagtgcgttacatatcacattagccagtcttcgctctgctaat aggcttttgattacgggaacgccattgcagaattcagttcgggaactttgggcacttctc catttcttgaatcctgaaatatttgagagcgctgaagtatttgaggaaagtttctctttc gcagctcttcgagatccggagcgagtcagttctttgcacaaaacgctccgtccatatatc attaggagacaaaagtccgatgtggaaaagtcgttgccaaagaaaacttacgcggttttg agggttggtatgacttccgcacaacagcaatactatcgttggcttttaacgaagaacttc gcgaaattgaacgcgggaaacaaggccagaggtatgggaaacacccagacattgcgaaac ctggtcatggaactgaagaaatgttgcaatcatccgttcctctttcctaactacgaggat acgtctgtgaccaccagtattgatgacttgatcagagcgtctggaaagatgatattgctg gataaacttctcttgcgcctgagagagaaaggtcatcgcgtgttgatcttctcacaaatg gtgaggatgttggatattcttcaggattactgccgaatgcgaaactttccttgccaacga cttgatggttcaatagcgaatgaagtacggcaaagagctgtcgatcacttcaatgctcca gattccaatgactacgtcttcctcctgtccactagggcaggtggactaggtattaacctc gcaacggcagacactgtcatcattttcgattccgactggaaccctcaaaacgacttgcaa gctgaaagtagggctcaccggattggacagaagaaggatgtgaaagtgttccgtctctta agccgggaaacggttgaggaagatatcttggagagagcgaaacgaaagcgagttcttgaa catttggtaattcatggcgttgagggaggggatcaaggagacgggaaagacgctcaagcg gctttcaagaaagaagaattaagtgccattttgcgcttcggggctgagaaattgtttgag aaggataaagagaacaccggagacgtaggagtcgattcaaaagaaaagggctctggtgaa cagaaagagaacgggacaggtgcagacgcaccgactgcacaggacgtgtacgatcaagat aaagatggaaaagcagaggaaaggcgggttttggaagtcgacgatatcgacgaactgctg gcgcgtgcaccaactgacgaagcatcgcaagttggtggggcccaacccagcgtaggagat tccctgctcaatgccttcaagtgggctgatttcaaaacagtcgagactgaggacgaggcg gaggatgagggtcccgaaactgaaatcatggccaacgctgctgcgaataagcttattgca attgatgcagaagcagcaagggccaaaaaagaggaggagcacgataagaggaaactggag aaggaaggggacaacgaattttgggacagagtcattcctggagaaatgaggaacgaagct atagctaatgacatggttctgggaacccgccgtcgcaaacgtacgaaaacattcggcgct gactccccgcatgatggaaagcgcaggcgcgttacacgcggtgtaaggacagtgatgaaa gtgacagatcccgatgagttaactgcgaaggaacaaaggagtttattgcgatcactacgc aagtttggagacgccacgctcatcacaattatcgtgaaagatgccggtttggaggatcgc attgaggaggagttagggcaagccatgattacagattgtcttgatcaagcgaaggcggct gtgaaaacagctcggagtactggagcaaagaagaaggaaactgatcaagatcctgagtac aattccaaagtcaacggacgttcgactacaaaggattcaaagagcaaagcatcacgcgtg ctcattgatgcactcggggagactggtgtcgatgcagtagatctcctgaagcgctgcgat gacttaaagatgctacgaagtcatataggaaatttcgaaaccgacacacagttcagactc cgccgtgcaatcaaagcgccaacgtacaatgttcgctggaagacgcaaaacgatgcaatg cttctagttggtgtatataggcatgggttcggaaactggacgagaattgcccaggacaag cagctgcatctcgctgacaaaatgaatgttgccggaaacacagaatgcaaacctggcgca ccagataccaccaagttgaccaggagagttacgacgctcttgcgagaggtagaaagagag gtccgacctaagccgagcgccaagaaggcgagcaagcgggatagacaagaaggaaaagtt gacaagaagagaacacctaaaggtcaaaagatttcaaagagccggaaaaaggatggggcg gtctctcgcggcggagcttcctcgaagcacacaaagaagagtgttcctataagcgggatg ggtgggatgcggaaggcactgaaggtatcgaacatcagtacgctgaaagaactgcgatcg ttgtcaaaggaaaacaacaaacttgacaatcatgaaaaaatcaagagaacgaaagagtgt ctcttgaaactagggcgtgcaattgagagacagaattcctccaacaaagtgcaagtcgat ctgtggcggtttgtgcatgatgtctgccacacgtgcctgccaggagacagactgcgttcg atatacgagaagctagccgatgtggagccctcaaacggatga

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