Chondrus crispus (carragheen): CHC_T00001563001
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Entry
CHC_T00001563001 CDS
T02916
Name
(RefSeq) hypothetical protein
KO
K22803
structural maintenance of chromosomes protein 5
Organism
ccp
Chondrus crispus (carragheen)
Brite
KEGG Orthology (KO) [BR:
ccp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccp03400
]
CHC_T00001563001
DNA repair and recombination proteins [BR:
ccp03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
CHC_T00001563001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_15
AAA_21
AAA_29
ABC_tran
AAA_16
Motif
Other DBs
NCBI-GeneID:
17320175
NCBI-ProteinID:
XP_005712460
UniProt:
R7Q3T2
LinkDB
All DBs
AA seq
1108 aa
AA seq
DB search
MRRSSRESTIPSAERHSRRSAASSPLVVDLDDDEQCQFVARSDPPRPITRFPGFRKGNIV
KIQMKNFLTFTNTAIHPGPCMNVILGPNGTGKSTVVNAVCIAFAGNPKLLGRSPDLGAFV
KHGEDRATVEAILYDPDLPHGTRTVTRSFDTDGKSYFEIDGERARQSDVISKVNRVYDIQ
LDNLSQFMPQEKIADFVNHKPEELLAIAVRSLGGTEKEREFEDLTSLDRTVSNFAQELNQ
KEAKLSEMLEQQAAEEAEVQAYRQQKQAQRRLKLYKKYLPYLESKQLKFAFVHMLSIRKQ
AEEEAAVLHQEYQRIQAGALNGLQQEVDAARETFLATKEASKVLSNRASALIGEVDRISV
VLSEKSKAVEDLEGRHERHQKRIGDTKVRLAQELQQAQEQDGPVSEHTIEEESARLRAQK
DRIRNDYSAENARKGPIDQRRQTSARKIKHYNHRLSQLGDVRQERIRALSRARNAPRHLG
DCDMLVRDMKASGAFRGHVFGPVAAEIEADNPYHARIMAACVSGFIMTAFVTETARDSRL
LMSECRKRFSGWSPDIISAPTTSNDEPDDYAIRSQVPARPVDDKLRRLGIVSVVSDIFQC
PPVVRAALNAQVGLHNIHVGSEQCDTFRDELRREDGVQAWFSPTSRCQVLRSRFDASVRN
LSVETSFATRRGSLFEGSMNETVQEKNRLGNMIREEEDLLRHAGQQMQDVEGRLENLSAN
LREINGKLQEAHQRRQARRQRAQKIEKIKSDLQSYVREAASQNVEKEKVELGKEIQRLQD
DSNAKIPSAVVKLKKLRDTVGRLDEQLAKRLDAERRLEAEQASHSAFQAQINEKRREVEQ
AKKASKEARGRWKAKLAEAKEVLPQQQIDANPEFFDVIAEKDVEWLTQEIARQEGEVEGL
GSGGRQAVLVYEHRQHKIDKLQNDVDADRATNKGKMEGLKKRKLAFLDWLQAGINKMRAK
FSNLYRRLGCAGDLELANKDSERIGDLELQILVSYRDDAELRPISFSGNSGGEKMCCTML
FCFSLLLEEERIPPFVFVDELNQGLDPSNEMKIMTMMFEDARSATAPQSFVITPKLLLDL
PFHEQTKTHIIFNGSVTGKLDVTAATGV
NT seq
3327 nt
NT seq
+upstream
nt +downstream
nt
atgcgccgctcctcgagggagtccaccatcccttcggcagagagacactcgcgccgctcg
gcagcctcctctccgctcgtcgtagacctcgacgacgacgagcagtgccagttcgtcgcg
cgttcagaccccccgcgccctattacacgcttccccggctttcgcaagggcaacatcgtc
aagattcagatgaagaactttctcacctttaccaataccgccattcatcccgggccttgt
atgaatgtcattctcggtccgaacggcacagggaagtccaccgttgtcaatgctgtttgt
attgcgtttgctggcaatccgaagttgctgggtcgcagcccggatctcggtgccttcgtt
aagcacggcgaggaccgcgccacggtcgaggctatattgtatgatccggacctccctcac
ggcacccgcactgtgacgaggtcgtttgacacagacggcaagagctactttgaaattgat
ggcgaacgcgccagacaatctgatgttatctctaaagtcaatcgagtctacgatatccaa
cttgacaatctcagtcaattcatgccgcaggaaaaaatcgctgactttgtcaaccacaaa
ccggaggaactccttgccattgctgtccgttccttgggaggtaccgaaaaagaaagagag
tttgaagacttgacatccctggataggactgtcagtaactttgcccaagagttaaaccag
aaggaggccaagctttcagaaatgctcgaacagcaagccgccgaagaagcagaggtacaa
gcataccgtcaacaaaaacaagctcaaagacgcttgaagctttacaaaaagtatttgcca
tatcttgaaagcaagcagctgaagtttgcctttgttcatatgctttcaatccgcaagcag
gctgaagaggaggctgctgttttacatcaggaataccaacgcattcaagctggggccttg
aacggtttgcagcaagaagtcgatgctgcgagagaaacatttcttgctaccaaagaggcc
tcgaaagttcttagcaatcgcgcatccgctctgattggcgaagtagataggatatctgtt
gttctctctgagaaatccaaggccgtggaagaccttgaggggaggcacgagaggcaccaa
aagagaattggtgacacaaaagttcgcctcgcccaggaattacaacaagcccaagaacaa
gatggccctgtatcagagcacacaatagaagaagaaagtgcgaggctgagagcccagaaa
gacagaatacgaaacgactattctgctgaaaacgcacggaagggccccattgaccaacgg
cgacaaacctctgcacgcaagattaagcattacaatcaccgactctcccagttgggggat
gttagacaagagagaattcgcgcattgagtagagctcgaaatgcgcccaggcatcttggg
gattgtgacatgctcgtgcgagatatgaaggccagtggagctttccgtggacacgtcttt
ggccctgtggcggcagagattgaagcagacaatccataccatgcgaggatcatggctgcg
tgtgtcagcggctttattatgacagcctttgtgacggagactgctcgggattctaggtta
ctcatgagtgaatgcaggaagcgattctccggatggtccccagatattatttccgccccc
accacatctaacgatgagcctgacgactacgccattcgatcacaggttcctgccaggcca
gttgacgacaagttgcggagacttggtatcgtttctgttgtgagtgacatctttcagtgt
cctcctgtggttcgcgctgctctcaatgcgcaagttgggttgcacaacattcatgtgggg
tctgagcaatgcgacacattcagagatgagctccgtcgagaagatggtgtgcaagcctgg
ttttcacctacttcgcgttgccaagttttgcgctcacggtttgatgcatcggtgcgcaat
ttgagcgtagaaactagcttcgccacccgcagaggttccttgtttgaggggagcatgaat
gaaaccgtgcaagagaaaaacagactaggaaacatgatccgggaagaggaagatcttctt
cgccacgcaggtcagcaaatgcaagacgtagaggggagactagaaaatctctctgcaaac
ttgcgtgagattaatgggaaattgcaagaagctcaccaacgacggcaggctcgaaggcaa
agagcgcaaaaaattgagaagatcaagagtgatttgcaaagttatgttagagaggccgct
tcgcaaaatgtggagaaggaaaaggtagagctggggaaagagattcaaagacttcaagat
gattccaacgcaaagataccgtccgcagttgtgaagctcaagaaactgcgagacaccgtg
ggaagactagacgaacagctggcgaagcgcttggatgcagaacgccgtttagaagcagaa
caggcaagtcactctgccttccaagcgcaaataaacgaaaagcggcgagaagttgaacaa
gccaagaaggcatcgaaagaggcaagaggtagatggaaagcgaaactggctgaagcaaaa
gaagtgctgccacagcagcaaattgacgcaaatccagaattttttgacgttattgcagaa
aaagatgtggagtggctcacgcaggaaattgcacgacaagaaggggaagttgaaggcctc
ggaagtggagggaggcaggcggtcttggtgtatgagcatcggcaacataaaattgacaaa
ttgcaaaatgatgtcgatgctgatcgggctactaacaagggcaagatggagggcttgaaa
aagaggaagttggcatttttggactggctccaagcggggatcaataagatgagagctaag
ttttctaacctatataggcgattaggttgtgccggtgacctcgaacttgccaacaaggac
tctgagcgtattggagacttagagttgcaaatcttggtttcgtatcgtgatgatgcagaa
cttcggcccataagtttttccggtaacagcggcggggaaaagatgtgctgcactatgctc
ttctgcttttcactgcttctagaagaagagaggataccaccgtttgtattcgtggatgag
ttgaaccagggccttgatccatcgaacgaaatgaagatcatgaccatgatgtttgaagat
gcgcgtagtgcgaccgcaccacaaagctttgtcatcacgcctaagcttttgctggatctt
ccgtttcacgaacagacgaagacacacattatttttaacggctcggtaactggaaaatta
gatgtaactgcggctacaggtgtgtga
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integrated database retrieval system
