Chondrus crispus (carragheen): CHC_T00001600001
Help
Entry
CHC_T00001600001 CDS
T02916
Name
(RefSeq) hypothetical protein
Organism
ccp
Chondrus crispus (carragheen)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FancD2
Motif
Other DBs
NCBI-GeneID:
17320244
NCBI-ProteinID:
XP_005712529
UniProt:
S0F2X8
LinkDB
All DBs
AA seq
1413 aa
AA seq
DB search
MVTCIVNKISEFGEESNAENNIATILLNQLRWLDFIVDGPALCESLLSIVPIVSYSVQRA
LIEALPEILDDSSREVAVTEMIRILEESPSLMGSVVDAIGALGVNDARLPDVNASILSTL
NAANRDMLPVSLKYLLRTCPPSLLSSTVSALRHTLAMPSLGPGPGRLSLDAVKSGLRMKK
QIADQVLKVLRGIDKPSDHKPSDFWLIIALFDSPMHRKPAEILFRKKAAKAVFSKALIDA
ALAPFADAFGGLTHRLLYIAGIALKSSELGARSTGITLYALVFQLFPDGNVRRNIVMALL
DHTGTRKAQEVDAALEALVVIARENETNRALLPHSAVIQGLLDFLEFFSDSQLRSIWTIL
GYLCRASSAKVIHESSSRGGERKKKTNSQQQKDAIMHAEEENCAGESELAMLEILLRKEL
THVDTFYRRIGVLGACTMIKVLGNSVENNILSMMLDIGRSHPLSQALAFDELARVFSDGT
PTSKDTAEFIRKTVSNVFEKKYIRDRDTLENLPTVNEVLPAELFGNLEGDDVEFCFSIAA
LARTGETLKDSQDAVRAMVPNLRLLCVMTASRYEGSLSEIDATIGAPLHMAVVPSEQSIA
NLPTRAKGDLLLSLFTAHGWVVELLNGFSDQESTEMKAKCIKRVDDLLTLSNQISLCVTH
IPLWKEVIFDSYSGSRCGPAQQRKDEFRRKAGKGSTGSRVLRESRELGAKGQEWLPFARQ
LDATALSLIRVTSPVSWRFTEVESECGKEGNPVTESVRLSSRGLLHLLSELAVHIEKIVG
GEFRDPNAIGVVLFRSSNSAAKNVEMGGSSAEASTSFRLKNFTALQTPLTALPSQIRRCL
DKILPNGNDSAESDSTIEVNRKSIELCLRCLAEALNSKAVADPAAAEFLFTVLGSIRLDG
SPPVEPSDPLTSEDIHIAAREAFGQLRVMLREIMAVDENQEDDDEQRGCADAIGFVACCS
ILGVLDSVYGHCSEMDQKRLGPQFSESAISVISHRWDIASLRSRRTQKLIPGIVKIYVQT
STDPFRTAEDLRLKVVSMTERQATLQNKPLETQNADGSSQRGASVLGTLTEQTVNAFTIA
ILEQYIWLFKSFRPRSFEDPEDAFQKMAEFMRTELPLYTLARQNQRMLGPVMRAGRTFVE
LFLKSCLPFLKENFKEHRSAVVQICKAHQKPTRVLQTFCAHSKFTRDSSLTGLVPPLRKS
LELLLYRVKDLMQSHNATDAFQLGNLKHRDINGDVLNSQHLQYKSESENESEYSSDESDG
DNMDQPIAHLPRLGNDSERKQKKPLGKSTGRLSRRNNSKIRKGQAEAKGQKRRSAEIGTQ
HLRGENEISATRAEAAIGTEHVALNDDEVAEDQVSRTQPKRRKKRRITYESDDERPRNPL
IDDEAGYGSGDEDDNDIGDLSQFIVFGDEEEEE
NT seq
4242 nt
NT seq
+upstream
nt +downstream
nt
atggtgacttgcatcgtgaataagatttctgagtttggagaagagtcgaatgctgagaac
aatatcgctacgattttgcttaatcagctgaggtggctagactttattgtcgatgggccc
gccttgtgtgagagccttctgtcgattgtacctatcgtttcctattccgtgcagcgagca
ctcatcgaggctcttcctgaaattctcgatgattcatcccgtgaggtggccgtgacggaa
atgataagaatattggaagagagtccgtcattgatgggttctgtcgttgacgccatagga
gctttaggtgtgaacgatgctcggcttccggatgtcaacgcctccatattgtcaaccctt
aacgctgccaatcgcgacatgcttcctgttagtctgaaatatctcttgcgtacgtgcccc
ccgagtctcctttcctccaccgttagcgcccttcgtcacactcttgcgatgcctagcttg
ggtccaggacctggacgtctttctttggatgccgtcaagtctggtttgcgcatgaagaag
caaatcgcagaccaagtgctaaaggtcctgcgcggcatcgacaagccctcggaccacaaa
ccgtcagacttttggctcataattgccctctttgactcaccgatgcatcgcaagccagca
gagattttgtttcgcaagaaggccgccaaggccgtgttctccaaagcccttatcgatgct
gctttggccccgttcgcagacgctttcggtggtcttactcacaggctgttgtacattgca
ggaattgctctgaagtcttctgagttgggagcacggagcacagggattactctgtacgcc
ctagtttttcaactcttcccggatggcaatgtcagacggaatatcgtcatggctcttctg
gaccacacaggaactcgaaaagcccaggaggtggacgccgctctcgaagcgcttgttgtg
atagctcgtgagaatgaaaccaaccgcgcccttttgcctcactcagctgtgattcaaggt
cttcttgactttctggaatttttctcggattcccaactacgatcaatatggacgattctt
gggtatttgtgcagggcgtcgtcggcgaaagtgatacatgaaagtagttctcgaggtggg
gagcgaaaaaagaaaacgaattctcagcagcagaaggatgcaatcatgcatgctgaggaa
gaaaactgcgcaggagaatctgaattggccatgttggagatacttcttcggaaggagctc
acacacgttgatactttctacagacgtattggtgtgttaggggcgtgcacgatgataaaa
gtccttggaaattccgtcgagaacaacatcctgtccatgatgctagacattggaagatca
cacccgcttagtcaagctttagcatttgatgagctggcgagggtattcagcgacggtaca
cctacatcgaaagatacggctgaattcataagaaagactgtctccaacgtttttgaaaag
aaatatattcgtgacagggatacgttggagaacctcccaactgtcaatgaggtacttcct
gctgagctctttggtaacctagaaggtgatgacgtcgaattttgtttctctattgctgcg
ctcgctagaactggtgagaccctcaaggatagtcaagatgctgtacgcgccatggttccg
aatctccgcctcttatgcgttatgactgccagcagatatgaaggatctctatccgagatc
gatgccactattggagctccgctgcatatggcagtggttccctccgaacagtccatagcg
aacctccctacacgggcaaaaggcgatttgttgctgagtcttttcacagcccacggatgg
gttgttgaacttctgaacggcttttcagatcaggagagcacagagatgaaagcgaaatgt
atcaagagagtggatgatctgctaaccctgagcaatcaaatatcactctgtgtcactcac
ataccgctttggaaggaggtaatctttgattcatacagtggaagtcgatgcggccccgca
caacaacggaaagacgagtttagacggaaggccggcaaaggctctacagggagtcgcgtc
ttgcgagaatcccgagagttaggtgcgaaaggacaagaatggctcccatttgcacgtcaa
ttagatgcaacagcattgtctctgatccgagtgacaagtccagtatcttggcgtttcact
gaggttgaaagtgagtgcgggaaggagggcaatccagtgacggaaagcgtcagactctca
tcaagaggactgcttcacttactctctgagcttgctgtgcacattgaaaaaattgtggga
ggggagtttcgcgaccccaatgccattggcgtagttttgtttcggtcatcaaattcagct
gcaaagaatgtggagatgggagggtcgtctgcggaagcttccacgagctttcgtctaaag
aacttcacggcattgcagaccccgttgaccgctctgccctctcagatccggcgatgttta
gataagatacttccaaatgggaatgactctgcagaaagtgattcaacgattgaggtcaat
aggaaaagtattgagctttgtttgagatgcctggcggaggctctgaactcaaaagctgtt
gcagaccctgcggccgcagaatttctctttacagttctgggttcgatcagacttgatggc
agtccccctgtggagccatcagatccccttacttcagaggacattcatattgctgcgaga
gaagccttcgggcagctgcgtgtaatgcttcgagaaataatggcagttgacgaaaatcaa
gaagatgatgacgagcaacgggggtgtgcggatgccatcggattcgtggcttgttgttcg
attttaggggtattggattctgtttatggacattgttccgaaatggatcaaaagagatta
ggacctcagttcagtgagagtgcaatctccgtaatcagccacagatgggatattgcttcg
ttgcgatcgcggaggacgcagaaacttatccctggtatagtcaaaatatacgtgcaaaca
tctaccgatccgtttaggaccgctgaagatcttcgtttgaaggtggtgtcaatgacggag
agacaagccacgctccagaacaagcccttggagacgcagaatgcagatggatcttctcag
cgtggtgcaagcgtcttagggaccctcacggagcaaaccgtaaatgcattcacaatagca
attttggagcaatatatttggctgttcaagtctttccggccacgttcttttgaggaccct
gaagacgcctttcagaaaatggcagagtttatgagaactgagcttccattatataccctt
gctcgtcaaaaccaaaggatgcttggaccagtaatgcgggccgggcgcacgttcgtggaa
ctctttcttaagtcttgcctaccgtttctaaaagaaaactttaaggaacatcgcagtgct
gttgtacagatatgcaaagcgcaccagaagccgacgagagttctccaaactttttgtgct
cacagcaaattcactcgtgactcctcgctgacaggcttggtcccgccattgcggaaatct
ttagaactgctgctgtaccgtgttaaggaccttatgcagtcacacaatgccaccgatgcc
ttccaactaggaaatctgaaacatcgagatatcaatggggatgtcctcaactcgcagcac
ctacaatacaagagtgaatccgagaatgaaagtgaatacagcagcgacgaaagcgacggt
gataatatggatcaaccaattgcacatctgccaaggctcggtaatgattctgaacgaaaa
cagaagaaaccgctaggaaaatctacgggtcgactaagcagaaggaataactccaaaatc
cggaagggacaggctgaagcgaagggacaaaaaagaagaagcgctgagattggcacacag
catctcagaggcgaaaatgaaatttccgccacaagagccgaggcggccattggtactgag
catgtggctctcaacgacgatgaggtggctgaagatcaagtctctcggacacagccaaag
cgaaggaagaaacgacgaatcacctatgaaagtgatgacgagcgacctcgtaacccgctg
attgatgatgaagctggttatggatctggcgacgaggacgacaatgacattggagatctc
tcccaatttattgtgtttggagacgaagaagaggaagaataa
DBGET
integrated database retrieval system
