Chondrus crispus (carragheen): CHC_T00001677001
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Entry
CHC_T00001677001 CDS
T02916
Name
(RefSeq) hypothetical protein
KO
K03135
transcription initiation factor TFIID subunit 11
Organism
ccp
Chondrus crispus (carragheen)
Pathway
ccp03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ccp00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
CHC_T00001677001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccp03021
]
CHC_T00001677001
Transcription machinery [BR:
ccp03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
CHC_T00001677001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAFII28
Motif
Other DBs
NCBI-GeneID:
17320398
NCBI-ProteinID:
XP_005712685
UniProt:
R7Q4E5
LinkDB
All DBs
AA seq
209 aa
AA seq
DB search
MAVDTAIVAKVPAGEAKVNHISGELQVSGSKGVKDAVATGERKSEGGKESKAKSAGAAEE
KKDSQTRGSTHAKDAKSEQKMEPGESGEEEAPLDLASFARYEHGEVAKLTAVQQRRYEQY
RRSDLKNPKVKKVLVSYNPTLQKASDLYIIAVKGLAKLFVGDVVETALDVKNQMGDKGAL
QPKHLREAYRRLRRSGVVPSTNDRSASFS
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
atggccgtcgatacggcaattgtcgcaaaagttcctgcgggtgaagctaaggttaatcac
atctcaggagagctgcaggtttccggtagcaagggagtgaaagacgctgtggccaccggt
gagcgcaaatcggaaggaggcaaggaatcaaaggcaaagagtgcaggtgctgcggaagag
aaaaaagattcacagacaagagggagcacccatgcgaaagatgctaagtcggaacaaaag
atggaacccggtgaaagcggtgaagaagaagccccactcgatttagcttctttcgcacga
tatgaacatggtgaagtcgcgaaactaactgccgtacagcaacgcagatatgagcagtac
aggagaagtgatttgaagaatcctaaggtgaagaaagtcctcgttagctacaaccctact
ttgcagaaagcctccgatctttatattatagctgtgaagggtttggcgaaattgtttgtt
ggtgacgtcgttgaaactgccctcgacgtcaaaaatcaaatgggagacaagggagccttg
cagccaaaacacttgcgtgaggcgtaccgaagactacgacggtctggagttgtcccctcg
actaacgatagatctgcttcattttcttga
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