Chondrus crispus (carragheen): CHC_T00001732001
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Entry
CHC_T00001732001 CDS
T02916
Name
(RefSeq) hypothetical protein
KO
K06185
ATP-binding cassette, subfamily F, member 2
Organism
ccp
Chondrus crispus (carragheen)
Brite
KEGG Orthology (KO) [BR:
ccp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ccp03009
]
CHC_T00001732001
Ribosome biogenesis [BR:
ccp03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
CHC_T00001732001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC_tran_Xtn
AAA_21
SMC_N
AAA_23
AAA_29
RsgA_GTPase
AAA_28
AAA_22
MMR_HSR1
AAA_14
AAA_15
NACHT
AAA_33
AAA_16
AAA_18
PRK
ATP-synt_ab
NB-ARC
Motif
Other DBs
NCBI-GeneID:
17320624
NCBI-ProteinID:
XP_005712909
UniProt:
R7Q6V8
LinkDB
All DBs
AA seq
536 aa
AA seq
DB search
MSVYGARDIKIGAFSLNFHNKVLIEDTMIELTVGRRYGLIGANGCGKSTFLRVLAERQVP
IPEYIDIHLLSEEAQPSEESALDYVINSAKKEVARLEARSDDILTEDGPESELLQDIYDR
LDELDPSTFESRASTILCGLGFDSVTIKKKTKDMSGGWRMRVALAKALFIQPTMLLLDEP
TNHLDLSACVWLEEYLSRYNKILIVVSHSQDFLDGVCTDTMVMQQQSLKYWGGNYSTYVR
TREEQDTNQLKLYKKQQEEIRHIKQFIASCGTYANLVRQAKSRQKQLDKMVEAGLLEPPY
EEPCFKFTFLGCGTLAPPLISFSDVAFSYSGKKQDYLYSDLSFGVDSESRISLVGPNGAG
KSTLLNLMVHKLSPTEGSVSHKSGLRVGRYHQHSADQLDFNLSPVEYIRQRYPKLHETLQ
GYRAEVGRFGITGEAQLSPIGHLSDGLKSRLVFAEIAIRKPHILLLDEPTNALDCTGIDA
LAEAINSFEGGVVLVSHDFRLLSQVAREIWVVEEGVKVWRGDILSYKESLKKGMKF
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtgtacggcgcacgcgacatcaagatcggcgccttctcgctcaacttccacaac
aaggtcctcatcgaggacaccatgatcgagctcaccgtcggtaggaggtacggcctcatc
ggcgctaacggatgcgggaagagtaccttcttgagggtcctcgccgagaggcaggtcccc
atccccgagtatatcgacattcatttgctctcggaggaggctcagccgagcgaggagtcg
gcgctggattatgtcatcaactcggcgaagaaggaggtcgcaaggctcgaggctcgctcg
gatgacatcttgacagaggacggccccgagagcgaactcttgcaggatatttatgaccgc
ctggatgagctcgacccctccacctttgagagccgtgctagtaccattctttgcggcttg
ggcttcgactcggtcaccattaagaagaagacaaaggatatgagcggaggctggagaatg
agggtcgcccttgccaaggccttgttcatccagcccaccatgctcctgcttgacgagcct
acaaaccatctcgacctttcagcttgcgtctggctcgaggagtatctctcccgctacaac
aaaattctcatcgtcgtctcgcattcccaggactttctcgacggcgtttgcactgacacc
atggtcatgcagcagcaatccctcaagtactggggtggaaattacagtacctacgtccgc
acgagggaagaacaggataccaaccagctcaagctgtacaagaaacagcaggaagaaatc
agacacatcaaacaatttatcgcctcatgcggtacatacgccaacttggttcgccaagca
aagtcaaggcaaaaacagctcgataagatggttgaagctggccttttggaaccaccatat
gaagaaccctgtttcaagtttactttcctgggttgtggaacacttgcacctccattgata
agtttctcagatgttgccttttcttattctggcaagaagcaggattacctttattctgat
cttagctttggcgttgacagcgaatccagaatctctctagtggggcccaatggagctgga
aagagtacattgctcaaccttatggtccataagctttctccgaccgagggaagtgtctcc
cacaagtcgggtttgcgagtcggccgctatcatcagcattctgccgaccagctcgacttt
aacctctctcccgtcgagtacattcgccagcggtatccaaagttgcacgaaacattgcaa
ggctatcgggctgaggtaggtcgatttggaattacgggcgaagcccaattgtcaccgatt
ggccatttgagcgatggtctcaagtcacgcttggtctttgctgagattgcaattcgcaag
ccacacatcttgcttttggacgagccgaccaacgcactcgattgcactggcattgatgcc
cttgccgaggccatcaactcttttgagggcggtgtagtattggtgtctcatgactttaga
ttacttagccaggtggcgagagaaatttgggtcgtagaggaaggggtcaaggtctggcgt
ggcgacatcttgtcgtacaaggagagtctcaagaagggtatgaagttctaa
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