Chondrus crispus (carragheen): CHC_T00001760001
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Entry
CHC_T00001760001 CDS
T02916
Name
(RefSeq) hypothetical protein
Organism
ccp
Chondrus crispus (carragheen)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sterol-sensing
Patched
MMPL
Motif
Other DBs
NCBI-GeneID:
17320533
NCBI-ProteinID:
XP_005712799
UniProt:
R7Q6L5
LinkDB
All DBs
AA seq
939 aa
AA seq
DB search
MATPHLPPEPPTASKPEPELELEPAAPRRGALFRLSASIDGAMRAFFFRLGYWVAANPFK
TVLFSLLVVAATLAGMLRFRSESRAAELWVPQGTVALKNQAYVEQRYGQTVRASTIAFVQ
KEGGASLATRDAFLQMLDVASAGYYLVADPINDEEGADGTPITYEERCLETKDAAGNVIC
RTNSVFNLFYDVDNVVKLENGRVDFFATVRVRIESLSDAEIKRVLDDPPPVNFDDSPFNA
DEIIGKENGAVRILMYTQLANNKQIVEGGELIDKEAEKLEENWTVLLLEGTPLLNGRVLD
WYVESLWSQGDSLAEALTGDLPMLAIGFVLLGVYIVLFLGDFHAVRSHMLLALGAIATTG
LALGACFGISSALGMFFGPVHQILPLLIVGIGIDDCFHVTRAVDEVNQKESNHGKSVQQK
IALALSQSGTAITVTSFTNVVVFLLSAISKLPALRFFSLWAAVGIFAAWGFAVTFYTALV
TFDLRRQDAKRRDCCPCFPPVQEVKELNWFKKPAGGFSRFFGNTFGPLITRPIVRIVLLV
LFVAGLAACSYGASQLYLKFEFAFFYPSGSAQREYQDQIDKYFKLGSPTNIYVRDRDLST
RENQLSLLELCKSDGVIAKNEWIQGDTLDCWYNAFRNENGVEGDDAVVDPQTFADRVARF
LEDPLYSRYSSSILLKDEKVEGCKFSVQYIFLDTNDDEISSLESVREAADSVGFGNAVDE
APAAFPYIFFDTFSEQYAALPGEIGISLGLASLAVAIVCLVLIGHPLVALISVVVVGIII
IDVLGLTYFSGINLSSVSVITLVLCTGIGVDFVVHIARSFLEQVGTRTERTIKALETMGP
PVFYAGFSTFLAIIVLSGARSYIFQVIFKGFLFLIIMGFLHGLILCPILLSLVGPASFYA
DEADKENAERVLEERIVGRQGAADEKLERRDEATEEESV
NT seq
2820 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccccgcaccttccgcccgagccgcccaccgcgtccaagcccgagcccgagctc
gagctcgagcccgcggcccccaggcgcggcgcgctcttccgcctgagcgcttccatcgac
ggcgccatgcgcgctttcttcttccgcctgggctactgggttgccgccaacccgttcaag
accgtcctgttctcgctgctggtcgtcgcggccacgctcgccggcatgctgcgcttccgc
tccgagtcgcgcgccgcagagctttgggtcccgcagggcaccgttgccctcaagaaccag
gcctacgtcgagcagcgctacggacagaccgtgcgcgcttccaccatcgccttcgtccag
aaggaaggcggcgccagcctcgccaccagggacgcctttttgcagatgctcgacgtcgct
agtgccggctactacctcgttgccgaccctatcaacgacgaggaaggcgccgatggcacg
cccatcacgtatgaggagcgctgcttggagacgaaggatgccgccggcaatgtcatttgt
cgcaccaactccgtcttcaacctgttctatgacgtggacaatgttgtcaagctggagaac
ggccgcgttgactttttcgccacggtgcgtgtcaggattgagtccctctccgacgctgag
attaagcgcgtgcttgacgacccaccgccagtcaattttgatgactcgcccttcaacgcc
gacgagatcatcggcaaggagaatggcgccgttaggattttgatgtacacccagctcgcg
aacaacaagcaaatcgtcgaaggaggcgaactcatcgacaaggaggccgagaagctcgag
gagaactggaccgtcctgctgctggagggcaccccgctgctgaacgggagggtgctcgac
tggtatgtcgaatcgctctggtcgcaaggcgactcgctggcagaggccctgacaggtgac
ttgcccatgctggccatcggcttcgtgctcctcggcgtctacatcgtcttattcctcggc
gactttcacgctgtccgctcgcacatgcttctcgccctcggcgccattgccaccaccggg
cttgcgctgggcgcgtgtttcggcatctcctccgccctcggcatgttctttggcccggtg
catcagattctcccgcttcttatcgtcggtattggtatcgacgactgcttccacgtgacc
cgtgccgtcgatgaggtcaaccagaaggagtccaaccacggaaagtccgtgcagcagaag
attgctcttgcgctgagccagtcgggcactgccatcacagtcacttcctttaccaacgtc
gtcgtctttttgctcagtgctatttctaaattacccgcgcttcgattcttctcgttgtgg
gccgcggtgggtatcttcgcggcttggggatttgctgtcacattctacactgccttggtc
actttcgacctccgcaggcaggatgcgaagcgccgagactgctgcccttgtttcccgcca
gtgcaggaagtgaaggaactcaattggttcaaaaagcctgccggagggttcagccgcttc
tttggaaacacctttggtccgctcatcacaaggcccattgttcgcatagttttgctcgtc
ctgtttgtcgcgggtcttgcggcctgcagttatggtgcatcgcagttgtatctcaaattc
gaattcgcgttcttctatcccagcgggtcggcacagagagagtatcaagatcagattgac
aagtacttcaaacttggcagtccgacaaatatctatgttcgagacagagacttgtccacg
agagaaaaccagctaagcctcttagagctttgtaagagcgatggggtaatcgccaagaac
gagtggattcagggagatactcttgactgctggtacaatgctttccggaacgagaatggt
gttgagggagatgatgctgttgtcgatccgcaaacatttgcggaccgcgtagcaagattc
ctagaggatcccctatactctcgatattcaagttccattctcttaaaggatgaaaaggtc
gagggctgcaagttttcggtacaatacattttcttggacaccaatgacgatgagatctcg
tcactagagagtgtgcgtgaggctgctgattcggttggcttcggaaacgctgtcgacgag
gcaccggccgcattcccttacatcttctttgataccttttctgaacaatatgctgctctc
ccaggcgagattggaatttctctaggtctcgcatccctagctgtggcaattgtgtgcctc
gtcttgatcggacacccgcttgttgctctgatcagtgttgtggtcgtaggcatcattatc
attgacgtgctggggttgacgtacttttcgggcattaaccttagctctgtaagtgtcatc
actcttgtgctttgcaccggtatcggtgtcgatttcgttgttcacatcgctcgttcattc
ttggaacaagtaggcacacgaactgagagaactatcaaggctttggagacaatgggtcct
ccagtgttctacgccggattttcaacattcctagccatcattgtactgtcgggtgccagg
tcttacatctttcaagtcattttcaagggattcttatttctgatcattatgggattcctt
cacgggttgattctttgtccgattctgctgtcccttgtaggacccgcgagcttctacgct
gacgaggcagataaggaaaacgctgagagagtacttgaggagcgcattgttgggcgccag
ggtgctgcagacgaaaagctagaacgaagggacgaggccaccgaggaggaaagtgtgtag
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