KEGG   Chondrus crispus (carragheen): CHC_T00001951001
Entry
CHC_T00001951001  CDS       T02916                                 
Name
(RefSeq) hypothetical protein
  KO
K05658  ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:7.6.2.2]
Organism
ccp  Chondrus crispus (carragheen)
Pathway
ccp02010  ABC transporters
Brite
KEGG Orthology (KO) [BR:ccp00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    CHC_T00001951001
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:ccp02000]
    CHC_T00001951001
   04147 Exosome [BR:ccp04147]
    CHC_T00001951001
   04090 CD molecules [BR:ccp04090]
    CHC_T00001951001
Enzymes [BR:ccp01000]
 7. Translocases
  7.6  Catalysing the translocation of other compounds
   7.6.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.6.2.2  ABC-type xenobiotic transporter
     CHC_T00001951001
Transporters [BR:ccp02000]
 ABC transporters, eukaryotic type
  ABCB (MDR/TAP) subfamily
   ABCB1, 4, 5 subgroups
    CHC_T00001951001
Exosome [BR:ccp04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   CHC_T00001951001
CD molecules [BR:ccp04090]
 Proteins
  CHC_T00001951001
SSDB
Motif
Pfam: ABC_membrane ABC_tran SMC_N ABC_ATPase Zeta_toxin AAA_22 RsgA_GTPase AAA_16 AAA_15 AAA_29 HUTI_composite_bact
Other DBs
NCBI-GeneID: 17320880
NCBI-ProteinID: XP_005713167
UniProt: R7Q5S3
LinkDB
AA seq 1290 aa
MQNVNCHDGGGWECDWLRQNRHACIERPLRGIAIKTTPGCTYSAVVDDQCKTWCPGDWPL
SRAGLAHACPLVPNRKLSFLTALRTPFTMEPGDSDLKPSSAPPKWKFWARKEKVPEEERK
YPPVPYIRLFRYASNADKLMLGLALLAAIGHGTLLPILTVIFGDVVDQFGPFLTAGAIES
DIDISDSIASKVNLFLYLAIVAFALSFLQLSLSVIAANRIGNDLRKKFFDNLTRQDCNFY
DDSEAGSLTHIVISDVNLIQGGIGDKLCTAVQYFTTFVTGVIVGFAYGWKLTLLILGVTP
ILLVAGAVFGNASADATGDGLGAYGEAGGVAQEVFSLIRTVTAFGGQEDELRRYEKSLDK
AYIASVKAAIASGFGLGTAMFCILSTYGLAFFVGANLARVSDPEIEPEMSPGDIDPQNDD
GLIPTEPTTGHVTFENLDFNYPKRITEEGVSALVLDNFNLDIAAGTSEAFVGKSGCGKST
LARMIQRFYDPIAGSVRLDGVDIRELNVRWLRSQIGVVAQMPSLFMLSIRDNIALVTNDD
IIEAAKLANAHNFIIKLPEGYDTMLGERGAMLSGGQKQRVCIARALIRNPKLLILDESTA
ALDTASERLVQDALDKAAAGRTTVTIAHRLSTIRNADNISCVDGGKVVERGPHDELVRRE
GGFYRAVHDLQNVQRDKMQKEKEAETEDDSDSKLAPVLAAQKSMSKTAHSTSVRDALAVE
EEKALAAVDKGVFWRTVKMNKGEFSYMFIGILGAVAVGVVWPIAAISLTELVEIMLTEND
PSDVRVWALSFKLTRRIRSDAFRALLRQEMGYFDMEENSVGALAGRLSSDAGAIKGLTGD
LFGVGVNVLGALVAGLTIAFVNCWELTLVVLAIIPGIALGGYFEMQASAGIDSGARKDFA
QANVVAAEAVDNIATVRTLGLEDYFASRYSKMIHKTRRDKLRKAVVTAIAFGFSEFCQYL
LWYATFKAGGNFVRDGRCSFKEMLLSSMAILFAAITFGNVSVFAPDVGASQIGATHIYRL
LDRESEIDPTSKDGEDVDHVAGDVSSKKVYFEYPRRPDVPVLRGLSIDVSRGKTLALVGT
SGHGKSTIISLLERFYSYREGTIHIDEHEISKARVATLRNHIGLVSQEPELFNRSVFENI
AYGAPHEDGTPITMTDVIEAAKKANAHEFVSALPQGYDTVVGPRGDALSGGQRQRVAIAR
SLIRAPPVLLLDEATSALDSASERLVQAALDKASDGRTTIVVAHRLSTIKDADVIAVVRK
GRIVESGTHGELLRKNGHYADLVQHQLSDV
NT seq 3873 nt   +upstreamnt  +downstreamnt
atgcaaaatgtgaattgccatgatggcggaggatgggaatgtgattggctgaggcaaaat
cgccacgcatgcattgaacgaccgctgcgggggattgccatcaaaacgacgcctgggtgc
acgtacagtgcagtagttgacgatcaatgcaaaacgtggtgtccgggagattggccactc
agtagagccgggctggcgcatgcttgtcccctcgtaccaaaccggaaactatcttttctc
actgcactccgcacgccattcaccatggaaccaggggactcggatctcaagccctcatcc
gcccctccgaaatggaagttctgggcacgcaaggagaaggtgcccgaggaagagaggaag
taccctcccgttccttacatcaggctcttccggtacgcctccaacgcagataaactcatg
ttggggttggcgctcctagcagcaattggtcacggcaccctgctccccatcctcactgtc
atcttcggcgatgtcgtcgaccagttcggcccgttcttgacggcaggcgccatcgaatcg
gacatcgatatttcggacagcattgcatcaaaggttaatctcttcctgtaccttgcaatc
gtcgctttcgccttgtcttttctccagttgagtctctcagttatagccgcgaatcgcatc
ggtaatgaccttaggaagaagtttttcgacaaccttaccagacaggattgcaacttttat
gatgatagcgaagctgggtctctcacacacatcgtcatctcagacgtcaatctcattcaa
ggcggcataggggacaagctctgtaccgccgtccagtatttcaccacgttcgtcacaggc
gtcattgttggctttgcatacggctggaagcttacgcttctgatccttggtgtcactccc
attcttcttgtcgccggtgctgtctttggaaacgcctcagccgacgccactggtgacggt
cttggtgcatacggagaggctggtggtgtcgctcaggaagtcttttcgctcatacgtaca
gtcaccgcttttggtggtcaggaggatgagctccgtaggtatgaaaagagcctcgacaag
gcttacatcgccagcgttaaagccgcaattgcctcgggctttggcttgggaactgccatg
ttttgcatcttaagcacgtatggtctcgccttctttgtgggtgcaaacctggctcgtgtt
tctgatcccgagatagaacccgagatgtctccaggtgatatcgaccctcaaaatgacgac
ggactcatccctaccgagccaaccaccgggcacgttacttttgagaacctcgacttcaac
tatccgaagagaatcactgaggaaggggtctccgccctcgtacttgacaacttcaattta
gatatcgcggcaggcacttctgaggctttcgtgggcaaatctggatgtggaaagagtact
ctcgccaggatgattcagcgtttttatgatcctatcgcagggtctgttcgtctagatggt
gtagacatccgggagttgaatgtccgctggttgcgctcccagatcggtgttgtggctcag
atgccatctctgttcatgctttccatccgggataatattgcactcgttacaaacgacgat
atcattgaagcagcaaagctcgcaaacgctcacaacttcattataaagctaccagagggc
tatgacacaatgcttggggagcgcggtgcgatgctgagtggcggtcagaaacagcgagtc
tgtatcgctcgtgccctgattcgcaatccaaagcttctcattcttgatgagtcaaccgcc
gcacttgacacagctagcgaaaggctggtccaagacgccctcgacaaggctgctgccggc
aggaccactgtcaccattgctcatcggctcagtacgatccgtaacgctgacaacatttct
tgtgtggatggaggaaaggtggttgagagaggacctcatgatgagctggtgaggcgcgag
ggaggcttttaccgtgccgttcatgatctgcagaatgtccaacgggataaaatgcagaaa
gagaaggaagcggagacagaggatgacagcgattcaaaattagctcctgtactggcggcg
cagaagtctatgagtaaaacggctcattctacatctgtacgagacgcccttgcggtagaa
gaagaaaaggctcttgcagctgtggataagggggttttctggagaaccgtgaagatgaac
aagggtgagttctcctacatgttcatcggaatcttgggtgccgttgcagttggtgtggtg
tggccaattgcggcgatctcgctgacggaactcgttgagatcatgctcacggaaaacgat
ccatctgatgtacgggtttgggccctatctttcaagctgacgaggcgcattcgttctgat
gctttccgtgcactcctgagacaggagatgggctacttcgacatggaggaaaactctgtt
ggtgcactggcagggcgcctttcttcggatgccggtgctatcaagggtctaacgggtgac
ctctttggcgttggtgtcaatgtgcttggtgcgctggtagcgggacttacgattgcattt
gtgaactgctgggaacttacccttgttgtccttgccatcattcctggaattgcattgggt
ggttactttgagatgcaggcctctgctggcattgactctggagcccgtaaggacttcgca
caggcgaacgtggttgcagctgaagctgtcgacaacattgctacggttagaactcttgga
ctggaggattacttcgcctctcgatatagcaagatgattcacaaaaccaggcgcgataag
ctgcgcaaagctgtcgttactgctatcgctttcggtttctctgagttctgccagtacttg
ctttggtatgcaacattcaaggcaggtggcaacttcgtgcgcgatgggagatgctcgttt
aaggaaatgcttttgtcttcaatggctattctgtttgctgctatcacgttcggcaacgtt
tccgtgttcgctcctgatgttggcgcttcccaaatcggggccacgcacatttaccgactt
ctggaccgagagagcgagatcgaccccaccagcaaggatggagaagacgttgatcacgtt
gccggtgatgtgtcctccaagaaagtttattttgaataccctcgccgtccagatgtgcct
gtcttgcgtggtctctctatcgacgtttcaagaggtaagaccctagctctcgtcggaaca
agtggacatggaaagagtactattatctccttgctggaacggttttactcttatcgggaa
ggaactattcacatcgatgaacatgaaatctcgaaagcacgtgtggcaactcttcgaaac
cacattggtttggtttcccaagaacctgaactcttcaaccggtctgtgtttgaaaacata
gcgtatggtgctccccacgaagacggcacaccgatcacaatgacagatgttatcgaggct
gccaagaaggccaatgcccatgagtttgtgtctgctcttccgcaaggatatgacacagta
gtaggacctcgcggcgatgcattgagtggaggacaacgacaacgtgtcgcaattgcgagg
agtttgattagagctcctccggttctgctgcttgacgaagctactagcgctttggacagc
gcaagtgagcgcttagttcaggcagccttggacaaggcttccgacggtaggacaacaatt
gttgtcgcacatagattatcgacgatcaaggatgctgatgtaatcgccgtcgtgcggaaa
ggtcgcattgtagagtcagggacacatggtgagctacttagaaagaacggccactacgcc
gatctggttcagcaccagctctcggatgtttag

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