Chondrus crispus (carragheen): CHC_T00002177001
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Entry
CHC_T00002177001 CDS
T02916
Name
(RefSeq) hypothetical protein
KO
K20222
importin-5
Organism
ccp
Chondrus crispus (carragheen)
Pathway
ccp03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ccp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
CHC_T00002177001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ccp03009
]
CHC_T00002177001
Ribosome biogenesis [BR:
ccp03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
CHC_T00002177001
Pre-60S particles
CHC_T00002177001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Importin_rep_4
HEAT_EZ
HEAT
TOR1L1_N
Importin_rep_6
HEAT_2
HEAT_EF3_N
Vac14_Fab1_bd
Cnd1
Adaptin_N
Motif
Other DBs
NCBI-GeneID:
17320923
NCBI-ProteinID:
XP_005713206
UniProt:
R7Q6D2
LinkDB
All DBs
AA seq
1113 aa
AA seq
DB search
MPAVALSPAAQQMHNILERLQSPDNTSRGIAENEYNQAVEQKGLCLDALSTLAASVGVNE
VVRATAAVLLRRSASDMWGGADELTRNNVKTRLLLGIRADGRKDLRKKLCDTIAEIGAPL
VDREPSQWPELLPTLFELSRSSIAYERESALYVFSQLADVLDQKVFAPHLATLKSAFQTG
LADADPGVQMAGLRATCSQLSLLESYLCNEFVDLVPLMIRPVQQAVAAGNDDDARQAIEL
LIDVVESEPKFWRKDLAAVCTLMLNIASNNDLSDESSPRQMALEFLVSVAEKLPSQCRKM
GTFVRNVFPVSLQMMLSREDDQEWYKQEIDEDTSEYTLFDCGQESLDRIAIALGGKAVLP
IAEAIIPSFLNNESSWAHRHAALLAISQIGEGCQKQIEAKLGDVIDLALARFRDPHPRVR
WAAINCIGQMCTDFGPRIQTDFHQKIVSHLILVMDDAGNPRVQSHAAAAVINFCDEATPD
IIAPYLDALLGKLQALLHSPHRITQEQAVTAIAAVADSAEEQFVKYYDWFMPRLKQVLAS
AAGNKELRKLRGKVMECISLVGLSVGPAKFGPDAAEVMNMLVRTAATQSEDPEDPQAFYL
MQAYARICRCLKGAFIQYLPHVMPGLLQAAQQKPDIQVRDIKEDEEPPEDPADGYETVQL
GDKRLSIRTSVLEDKAVACTMLACFIAELGGGFYDYVEPVTELMVPLLKFFYHDECRTAA
ANALPDLIKCVMESGKDPTGAQVVRMAQYMTIPLIDAIKGEPDVEVLVHMVQALGRIAEL
VVAPGLSPDLMVPAAQALSTVLLESEARNIEREQLAEQEEWDEEAQEDAEGDEQKEEELL
EKAATTTGALLKNHSKSGFVQAFRMPNKLGEGTDAVSTMQMFWVRMHASRQAYERYAALC
AFDDLIMYGGAEGVSVISDTLPAMKAYCTDQDADVRQAAAFGVGICAQVGGEAFMSSAGS
AVVHDLEKVIRDPNARSEVAVQASDNAVSALLKIMEYQPACLGDNAMSYGRLILEYLPAE
ADTAEAKLMHATLVRFVQAGDTRILGENAANMPRILFVLLSVLGTELLEESATRPAVDVI
KGLESKYPVEVLQGAIALLPDELKQKMQMVLAA
NT seq
3342 nt
NT seq
+upstream
nt +downstream
nt
atgcccgccgtcgccctctcccccgccgcccagcaaatgcacaacatccttgagcgtctg
caaagccccgacaacacctcacgcggcatcgctgaaaacgagtacaaccaagccgtcgaa
cagaagggcctctgtctcgacgccctctccaccctcgccgcctcggtcggtgtcaacgaa
gttgtccgcgccacggccgccgtcttgcttcgtcgcagcgcttcagacatgtggggtggc
gctgatgaactcacaaggaacaacgtcaagacacgcctactgctggggattcgcgccgac
ggccgcaaggatctcaggaaaaagttgtgcgacaccatcgccgagatcggcgcaccgcta
gtcgatcgcgagccctcgcaatggccagagctcctccccactttgttcgagctcagcagg
agttctatcgcttatgagcgtgagagtgccttgtacgttttttcccagctcgccgatgtg
cttgaccagaaggtttttgcaccacatctcgctaccttgaagagcgccttccaaacggga
ctggctgatgctgacccaggcgtccagatggccggtctgagggctacatgtagccagctt
agcttgttggagagttatctgtgcaatgagtttgtcgatttggttccgctcatgattcga
cccgtgcagcaggcagtcgctgcggggaacgatgacgatgcgcgtcaggccattgagttg
ctgattgatgttgtggaaagtgagcccaagttttggcgaaaggatctggctgccgtctgc
accctcatgcttaatattgcctcgaataatgatcttagcgatgaatcgagtccgcgccag
atggccctcgaatttctggtttcagtcgcggagaagctcccgtcgcagtgcaggaagatg
ggcacttttgtccggaacgtctttccagttagcttgcagatgatgctgtcgagggaggat
gatcaagaatggtacaagcaggagatagacgaggatacctcggagtacacgcttttcgat
tgcggtcaggagagtttggatcgcattgctattgcattggggggcaaggctgtgctcccc
atcgctgaggctatcatcccgtcatttttgaacaatgagagctcatgggcgcatcgtcac
gccgccttgctggctatctctcagattggagaaggctgccaaaagcagattgaagcgaag
cttggtgacgtcattgaccttgcactcgccagatttagagaccctcatccccgcgttcgt
tgggcagctattaattgtattggacagatgtgtaccgattttggccctcgcatccaaacg
gatttccaccagaagattgtgtcgcatttgattcttgtcatggacgatgccggcaaccca
cgcgtgcagagccatgccgccgctgctgtgatcaacttctgtgatgaagctactcccgac
ataattgctccttatcttgatgcattattgggcaagcttcaagctctgcttcattccccg
catcgtattactcaagaacaggctgtcactgccattgcggcagtagcagactctgcggaa
gagcagtttgtcaaatactacgattggtttatgcctcggctcaagcaagtattagcatca
gcagccgggaacaaggagctaagaaagctgcgggggaaggtcatggagtgcatttcgctg
gtgggtctgagtgtcggccccgcgaaattcggtccggatgctgctgaagtaatgaacatg
cttgttcgcaccgctgccacgcaatcggaagaccccgaagacccacaagcgttctacttg
atgcaagcgtacgcacggatttgccggtgcttgaagggtgctttcattcagtacttgcct
catgttatgccgggtctgctgcaagccgcacagcaaaagcctgatattcaagtccgagat
atcaaggaagacgaagaaccaccagaggatccagcagatggctacgaaacagtgcaatta
ggggacaagaggttgagcattagaacgtctgtacttgaagacaaagcagttgcatgcact
atgcttgcgtgcttcattgctgaactgggtggtgggttctatgactatgtagaaccagta
acagaactcatggttcctctactgaagtttttctaccacgatgaatgccgaacagctgct
gctaatgcgcttccagatcttatcaaatgcgttatggagtccggaaaagacccaacaggc
gcgcaggttgtccgcatggcgcagtacatgactattccactcattgatgctatcaaagga
gaaccagacgtcgaggtcttggtccacatggtgcaagcacttggtcgtattgctgaactt
gtcgttgcccctgggctgtccccagatctcatggttccggccgcgcaagctttgtcaact
gttctcttagagagcgaagctcgtaacatagaacgcgagcagctggcagaacaagaagaa
tgggacgaggaggctcaagaagatgcggagggtgatgagcagaaggaggaggaacttttg
gaaaaggcggcgacaacgaccggagccctgttgaagaatcactcaaaatctggatttgtg
caggcgttcaggatgccaaacaagcttggtgagggaactgatgcagtctcaacgatgcaa
atgttttgggttcggatgcatgcatcgcgacaggcttacgagcgatacgctgccttgtgt
gcgtttgatgatctcatcatgtatggtggcgctgaaggcgtgagtgtaatcagtgacacg
cttccagcaatgaaagcgtactgcacggatcaggatgctgatgtgcgtcaagcagctgcg
ttcggagtgggtatctgcgcgcaggtgggtggggaagctttcatgtcgtcggcgggttct
gctgtcgtacatgacctggagaaagtgattcgggatccgaatgcacgatcagaggttgca
gtgcaggcctcagacaatgctgtgtcagcgctgctgaaaattatggagtaccaacctgcg
tgtttgggcgacaatgccatgtcttacgggagattgatactggagtacttaccggctgag
gcagacactgctgaagcgaaactaatgcacgccactctggtgcgattcgtacaagcaggg
gacacaagaatattaggggaaaacgcggcaaatatgccgaggattctttttgtactgttg
agtgtgctagggacggagttgctagaagaatcggccacacggccagccgttgatgtgatc
aaggggttagaatcgaaatacccagtagaagtgctacaaggagcgattgctcttcttccg
gatgagctgaagcaaaaaatgcaaatggtgctcgcagcttag
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integrated database retrieval system
