Chondrus crispus (carragheen): CHC_T00002241001
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Entry
CHC_T00002241001 CDS
T02916
Name
(RefSeq) hypothetical protein
KO
K03538
ribonuclease P protein subunit POP4 [EC:
3.1.26.5
]
Organism
ccp
Chondrus crispus (carragheen)
Pathway
ccp03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ccp00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
CHC_T00002241001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ccp03009
]
CHC_T00002241001
03016 Transfer RNA biogenesis [BR:
ccp03016
]
CHC_T00002241001
03029 Mitochondrial biogenesis [BR:
ccp03029
]
CHC_T00002241001
Enzymes [BR:
ccp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.5 ribonuclease P
CHC_T00002241001
Ribosome biogenesis [BR:
ccp03009
]
Eukaryotic type
Pre-60S particles
RNases
RNase MRP
CHC_T00002241001
Transfer RNA biogenesis [BR:
ccp03016
]
Eukaryotic type
5'processing factors
Ribonucrease P
CHC_T00002241001
Mitochondrial biogenesis [BR:
ccp03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
RNase MRP
CHC_T00002241001
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_P-MRP_p29
ManC_GMP_beta-helix
Motif
Other DBs
NCBI-GeneID:
17320977
NCBI-ProteinID:
XP_005713249
UniProt:
R7Q7U2
LinkDB
All DBs
AA seq
279 aa
AA seq
DB search
MIEHVIRKRVAEKQILENDYLQLSHLHCAGVLPSPCRQVRRRRPVQHSQLPPPFIPTSTP
HFSRMAQEQRASVGLYEPLPQRLGGTNARPSSVSLGSILPFPRGANIPAEDALNARVRNR
ALLLDSDSKVKKTDTKLKSRKKGRAAAGKVVIPKAEQKYELYVPLMQLWTDYASKLIKDE
NVTNYGDRVLRMDLHGAPVHVVRSRDPGLVGIKGILVAETANTIIVVTEKDRALTVPKNV
AVIRIEFGKIALEISLPALQFRASERAARKIKKRHLPAL
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atgattgagcatgtaatcagaaaaagagtcgcggaaaagcaaattctggaaaacgattat
ctgcaactctcacaccttcactgtgccggagtgttgccttcgccctgccgccaagtacga
cgccggcggccagtgcagcattcccaattgcctccgccgtttatccccacttcgactccc
cacttcagccggatggcccaggaacaacgggctagtgtaggtctctacgagccgctgcct
cagcgactcggcggtactaacgcgcgaccctcgtctgtatcgctgggttccatcttgcca
ttcccccgcggcgccaacatacccgctgaggacgcgctgaacgctcgagtgagaaaccgc
gctctgctgttggacagcgacagcaaagtcaaaaaaactgatacgaagctcaaatcgcgc
aaaaagggacgcgcggccgctgggaaagtcgtcatccccaaggcggagcagaagtacgag
ctatacgtccctcttatgcagctgtggacggactacgcatccaagctgatcaaggatgaa
aacgtgaccaactacggcgaccgcgtgctgcgcatggacctgcatggagcgcctgtccac
gtggtgaggtcgcgcgatccggggctcgtaggcattaagggaattctcgtcgcggagact
gcgaataccatcatagtggtcaccgagaaggaccgggcgctcacggttccgaagaacgtt
gcggtgattcgtattgagtttggcaagattgcattggagatttcgctgccggctctccag
tttagagctagcgaaagggcagcacgcaagatcaagaaacgacatctacctgcgttgtag
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