Chondrus crispus (carragheen): CHC_T00002348001
Help
Entry
CHC_T00002348001 CDS
T02916
Name
(RefSeq) hypothetical protein
KO
K06636
structural maintenance of chromosome 1
Organism
ccp
Chondrus crispus (carragheen)
Brite
KEGG Orthology (KO) [BR:
ccp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccp03036
]
CHC_T00002348001
Chromosome and associated proteins [BR:
ccp03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
CHC_T00002348001
Meiosis-specific proteins
Cohesin complex and associated proteins
CHC_T00002348001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_21
AAA_29
AAA_15
Laminin_II
ABC_tran
DUF948
Motif
Other DBs
NCBI-GeneID:
17321066
NCBI-ProteinID:
XP_005713354
UniProt:
R7Q858
LinkDB
All DBs
AA seq
1242 aa
AA seq
DB search
MGRLDRLELENFKSYGGHVIVGPFKGFTAVVGTNGSGKSNLMDAISFVLGVRTAQLRGNQ
LRDLVYRNQEDENDDASRRRAYVKLVYQQSDGDDPNGEIEFMRTVTVAGSSEYRVKGRVV
SLERYNAELAKIGVLVKARNFLVFQNEVENIASKSPRELSVMFEEVSESAELRASYEDAL
AEKDSAEEQVTEFWRKRKGMVAEKRQCREQKEEAERFRRLQGDIADVKTESALYELFHVD
EDLKLVNVDANIIKDELDVHERQFAKKESALKAEKRLVVELEKERVKLERRNRRIADEIE
KLRPLEVKYETEKSGITRRIKGDERSLAKLKAKFEEGSDELRSIEAELKKCIGEIETLQN
DIEEAEEASVSPESMAEYRSLKDVVATRTSVLQQELEVAKQNANASAKQKTALQARERDL
EERQEAAGNSLSVYRKRVDELGQQIRVTRLEIANATQEQSQMSDVSKERDSVRMALEKTI
NDAIQALRDAKADMNESGRERAFNAAFENMRRLFPGVHGRLSDLCKPTQTRYREAVAVVF
GKLMDAIVVDNERTGTECIRFLKDQRVGMATFIPLENVRPRAIDESLRRLGGTARLAIDV
VNYDEYIHKAVLYSAQNAVVCDTLDEARHLRYGGGRKIKICSLDGTLINKAGFMTGGIGQ
AEMGRARKWDRAEIETLKRKRHVAEQELQAMGAAESDRRTAASMAEHMGELQRKLSTLEL
DIRGATSSVQTAEKDVEHTTNEIEYLRPQLQTATQAHTNLTRSVESIEKRLHGLENDLFG
DFAARHGIENVQQFEEQFVRKSEKMRARKLELETKEASLQSKFNYHRTQQSRTSITRLEK
RVEAQASRKRTVEESLESLGTKRAELESRAESVEGEISRISTEKQNAVDAITEKRHDYRK
ENEGVSEKKKQLAEKRAKIEQLMGQRKRLLTTAKVNQVAIPLLEQDDSERQEDILDTEGD
AVMAATDAGDAGESDPTSVAVDVNVEVDYSSLSRRLRAAGTANKQREMLSSLSEKVRTME
QQLDGLTPNLRASEHMSDVQIKLAEIDRETENARERARKAVSSFEDIKQSRHDRFSACFS
HVAEKINEVYKQLTKSDTYPMGGTAYLSLEQQDEPYLGGIKFNAMPPTKRFRDMDQLSGG
ERTVAALALLFAIHDFRPSPFFVLDEVDAALDSLNVGKVSTYVKSRAPDLQTIVISLKDS
FYERADALIGIYRDVSAKGSRLLTLDLTAYDEQTKSLPVAAV
NT seq
3729 nt
NT seq
+upstream
nt +downstream
nt
atgggtcgtctagaccgtctggagttggaaaacttcaagagctacggtggtcatgtgatc
gttggtccgttcaaaggcttcacagctgttgttgggactaacggtagtggcaagagtaat
ctcatggatgctatctcttttgtgctcggcgtgcgtaccgctcagctccgcggtaaccaa
cttcgcgacctagtgtaccgaaatcaagaggacgaaaatgacgacgcgtctcgtcgacgt
gcttatgttaagctcgtgtatcaacaaagtgatggagacgaccccaatggggagatcgaa
ttcatgaggacagtcactgtagcaggttctagcgagtaccgcgtgaagggacgcgtagtt
tcgttagaaaggtacaatgccgagcttgcgaagataggcgtcttggtgaaagcgagaaac
tttcttgttttccagaatgaggtcgagaacattgcctccaagtctcccagagaactgtca
gtcatgtttgaggaggtatcggaatcagcggagttgagagcatcttacgaagatgcactt
gctgagaaggactcagcagaagaacaggttacagaattttggcgaaagagaaagggtatg
gttgcagagaagcgccaatgtcgcgagcaaaaggaagaagcagagcgatttcgacgcttg
caaggcgatattgcggatgtgaagacagagagtgcactatatgaactctttcacgtggat
gaagacctcaaacttgttaatgtcgatgcaaacatcatcaaagatgagcttgatgtgcat
gaaagacaattcgcgaagaaagaatccgcgttaaaagcagagaaaaggctagtggttgag
ttagagaaagagcgagtcaaattagagagaaggaacaggagaattgctgacgaaattgag
aagcttcgtcctctggaagtgaaatatgagacggagaagtcaggaatcactcggcgaatc
aaaggagacgaacgttcactcgccaaacttaaggcaaagtttgaagagggatccgacgaa
ctgaggtccattgaggccgaactgaaaaaatgcataggggaaatcgagaccttgcaaaac
gatattgaagaagccgaagaggcgagcgtttctccggagagcatggcagagtaccgctct
ttgaaagatgtggtcgcgacgagaacgtctgtcctgcagcaggagctggaagtagcaaaa
caaaacgcgaatgcgtcagcgaagcagaagactgcattgcaagcccgagaaagggacttg
gaggaacgccaggaggccgctgggaatagtctttcagtttacagaaagagagttgacgag
ctcggccagcaaatccgtgtcacccgacttgagattgcgaacgccacacaagaacaatcg
caaatgtcagacgtgagtaaagagcgggacagcgtgcgcatggcattggaaaagaccatt
aacgatgccattcaggccttacgcgatgcgaaagctgatatgaacgaaagcggacgtgag
cgggccttcaacgcagcctttgagaacatgcgacgactattccctggcgttcatggccgc
ttgtcagacttgtgcaagccaacccaaacgcgatacagggaagctgttgctgtagtgttc
ggcaaactgatggatgcaatcgttgtcgataatgaaagaactgggacagaatgtatcaga
tttctcaaggaccagcgcgttggtatggctacgtttatcccgttagaaaacgtccgacct
cgagctatcgatgagtccttgaggcgccttggcggcacagcacggcttgcaatagacgtt
gtgaactacgacgaatatatccacaaagctgtcctatattctgctcagaatgctgtagtc
tgtgacacgctggacgaagcacggcatctacgctatggtgggggaagaaagatcaagatt
tgctctcttgacggtacactcatcaacaaggcgggattcatgactggtggaatcggccag
gctgaaatgggtcgagcccgaaagtgggatagagcggagattgaaaccttgaaacgcaag
agacatgttgctgaacaggaactgcaagcaatgggtgcagcagaatctgacagacgaaca
gccgcctccatggcagagcacatgggagaactgcagagaaagctgtccactctggaatta
gacattcgcggcgcaacatcgagcgttcaaacagcagagaaagatgtcgaacataccaca
aacgaaattgagtacctacgcccacagctccaaaccgccacccaagctcatacgaactta
acccggagtgtggagtcaatcgaaaaacgtcttcacggattagaaaatgatctgttcgga
gattttgctgctcgccatggcattgaaaatgtccagcagtttgaggaacaattcgtgcga
aaatcagaaaagatgagggcaaggaaacttgaactggagacgaaggaagcgagtttgcaa
tcaaaattcaattatcatcgaacacagcagagccgaaccagcatcactcgattggagaag
cgagttgaagctcaggcttctcgcaagagaacagtagaagaaagtctggaaagtttaggc
accaagcgagccgagctagagagccgagctgaaagcgtcgagggtgaaatatcaagaatc
agcaccgagaaacaaaacgctgttgacgccattaccgagaagcgccacgattatcggaag
gaaaacgagggagtgagtgaaaagaagaaacagctggcggagaagcgtgcgaaaattgaa
caattgatggggcagcgcaaaaggttgcttacaaccgccaaggtaaaccaagtcgccatt
ccgctcctggagcaagacgattccgaaaggcaggaggatattctcgatacagaaggtgat
gcggtgatggcggcaaccgacgctggggatgctggggagagtgatcccacctctgtcgct
gtggacgtcaacgttgaagtagactactcttctctctcaagacgattacgagctgcaggc
accgcaaacaaacaaagagaaatgctatcatctctttcagagaaagtccgcacaatggag
cagcaattggatgggcttacgccgaacttgcgagccagtgagcacatgtcggatgtgcag
atcaagctcgcagagattgacagagagactgaaaacgctcgggaaagagcgcggaaggct
gtgtcatcctttgaagacatcaagcaatcccggcacgaccgtttcagcgcgtgtttttcc
catgtggctgaaaaaatcaatgaagtctataagcagctcacgaagagcgatacctatccc
atgggaggaaccgcatatctctctctcgagcaacaagatgaaccatatcttggcggcatt
aaattcaacgctatgccaccaactaagagattccgagatatggaccagttaagcggaggt
gaacgaaccgttgctgctcttgcgcttctctttgcgatccacgactttcgtcccagccca
ttttttgttctcgacgaggttgacgctgctcttgacagcctcaatgtaggaaaagtatct
acctacgttaaatctcgagcacccgatttgcaaactatcgtgatcagtctcaaagattca
ttttacgagcgggctgatgcgctcattggaatatatagggatgtcagcgcgaaaggatct
cgcttgctgacgctcgatctgactgcgtatgatgaacaaacgaagtcactgcctgttgca
gctgtctga
DBGET
integrated database retrieval system