Chondrus crispus (carragheen): CHC_T00002489001
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Entry
CHC_T00002489001 CDS
T02916
Name
(RefSeq) hypothetical protein
KO
K17985
activating molecule in BECN1-regulated autophagy protein 1
Organism
ccp
Chondrus crispus (carragheen)
Brite
KEGG Orthology (KO) [BR:
ccp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccp04131
]
CHC_T00002489001
03029 Mitochondrial biogenesis [BR:
ccp03029
]
CHC_T00002489001
Membrane trafficking [BR:
ccp04131
]
Autophagy
Mitophagy
PINK1-Parkin associated proteins
CHC_T00002489001
Mitochondrial biogenesis [BR:
ccp03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
CHC_T00002489001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
EIF3I
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
ANAPC4_WD40
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_RIG_2nd
Motif
Other DBs
NCBI-GeneID:
17321257
NCBI-ProteinID:
XP_005713517
UniProt:
R7Q795
LinkDB
All DBs
AA seq
521 aa
AA seq
DB search
MNIVRRRPRATAGFSFVRDRETGGEPPTSPDLLSWVEDNTLRRLDRGKYVPLDRPDPLVR
STISIAFSHDGRYFASTHGDHSVKVFRYPSGEQIACLDGHPRTPWTVRFHPKDSSILASG
CLGCECRVWDVSQGECIRKHTFASSISCVSFNPDGSLLAITSGSNLLLWNYMEAAPNNSR
STSSAIDDIRGPGVPRKLLGGVNPFHMVDFHPSGTMLMTGEKNRSPPPPTGAPSNQEEQF
TLKLVIHRFDRRIVKKFDDPVLEVPRAVAYNDAGIHFSPCGTMLAACIPVHEHSDSFKIA
VMSLVKRNQIKIGTVMYETALDRGHVTALTNLKFSSTSHHLLAGFSFRPKNPVLRGHAEH
YDQTAGRGADGGMRRPNQVGVVDIYNVSEKFEMIRSLRADMDLTEGQEGGAEDEINVAVF
APVFGIADGVVYGTQKGRIRMFQQATGADMKAEPCGESHADSCSSSAWTGSTATTWSSHR
APYVVPPISRRQRLRNTLVREQAPSGDYRDTTPGSNPVQLR
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgaacatcgtccgccgtcgcccacgcgccaccgcgggcttttcgtttgtccgcgatcgc
gagacgggcggtgaaccccccacatctccggacctgctctcttgggttgaggacaacacc
ttacgccgcctggaccgcggaaaatacgtccccctcgaccgcccggatcctttggtgcgc
tccaccatcagcatcgctttttcccacgacggcaggtattttgcttctactcatggcgat
cattccgtcaaggtcttccgctacccctcaggagagcaaatcgcatgcctcgatggccac
ccgcgcaccccgtggaccgttcgtttccatccaaaagattcctccatcctagcctcgggc
tgcttgggttgcgagtgtcgcgtctgggacgtttctcaaggcgaatgcatcaggaagcac
acttttgcttccagcatttcttgtgtcagtttcaatccagacggcagcttgctcgctatt
acgtcaggtagcaacttgctgctttggaactatatggaggccgcgccgaacaactctcgc
tccacgagctccgctatcgacgacatccgcggcccgggggttcctcgaaaattgcttggc
ggtgtgaacccttttcacatggtcgactttcatccgtcaggcaccatgctcatgacggga
gagaagaataggtctcccccgccaccgacgggcgccccgtctaatcaagaggagcagttc
actctcaagctcgttatccaccgctttgatcgtcgcattgtgaagaaatttgatgatcct
gtgctagaggttcctcgtgcggtggcgtacaatgatgcaggcatccatttttctccctgc
ggtaccatgctggcggcttgcatacccgtgcacgagcatagcgattcctttaagattgcg
gtcatgtcacttgtcaagcgcaatcagatcaagatcggcacggtcatgtacgagacggct
ctggatagagggcatgtcactgctttgaccaatctcaagttctcatccacgtcacatcac
ttgctggccggcttttcgtttcggccgaagaatccagtccttcgtgggcacgcagaacac
tatgatcagacagctggacggggtgccgatggtggcatgcgccgtcctaatcaagtaggc
gtagtagatatatacaatgtgagtgagaagtttgaaatgatccgaagcttgcgcgcagac
atggatctcacagaaggtcaagaagggggggctgaggatgagattaacgtggcagtattt
gcgcctgtgtttggcattgcggacggagttgtgtacggtactcaaaagggacgtatccgc
atgtttcagcaggctactggtgctgacatgaaggcagagccttgtggcgaatcgcatgca
gacagttgcagctcatcggcatggacaggctcaacagcaacaacctggtcatctcatagg
gcaccgtacgttgttccgccgatcagtcgaaggcaacgcttgagaaacacactggttcga
gaacaagctccttctggcgattatagggacaccacaccaggaagtaatccagttcagctc
cgttaa
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integrated database retrieval system