Chondrus crispus (carragheen): CHC_T00002552001
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Entry
CHC_T00002552001 CDS
T02916
Name
(RefSeq) hypothetical protein
KO
K14794
ribosomal RNA-processing protein 12
Organism
ccp
Chondrus crispus (carragheen)
Brite
KEGG Orthology (KO) [BR:
ccp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ccp03009
]
CHC_T00002552001
Ribosome biogenesis [BR:
ccp03009
]
Eukaryotic type
90S particles
Other 90S particles
CHC_T00002552001
Pre-60S particles
Other pre-60S particles
CHC_T00002552001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRP12_HEAT
Motif
Other DBs
NCBI-GeneID:
17321286
NCBI-ProteinID:
XP_005713569
UniProt:
R7Q8E1
LinkDB
All DBs
AA seq
860 aa
AA seq
DB search
MREKALDSNDRKSQDVANGVLSAIVRGGGVEQVLNTCAIQYDEKLHITNAWVLPILRDNI
CGAPLSLFSNSFIPVIDQLKEKIVARGKEGRVIEMKNLSIYVSQLWALLPGFCNKPTDLG
HDGVMTSAFKSIHLCLSTKDEMSIQQVAVAALRQLALSLQGLSSEDPMTTEKRESFGSRL
KKLFPAILGAAETTSQDRRRNLLEAVTTSCQATKNSGLVSGLLRKSIRRLLELQLGSSPK
SPDAMVDDEDHGIQRHYAMADIAIAVIESGKVPHDAAELNYLEKAMSPFLLDAKQSSMQK
KAYRAMALLVGAGSGSSESEELLSVAKRVAEAGSRVAPGAKAVRQHLLVAYINQHVRLIG
DEKKEYLATLTELFLSEIVLATRDTSEKTRSSAFETLITLARGWNSAGTGNDMTGLREFL
VAVSAGLGGRTVSMLSATLTSLGRMIYEFRGEASADDKLANHVDSLFGSAVNNGANVDMS
GGAVDQDEAVQSERVLPGPIAILLRHTSFEVQKAALGVVKIATKTLSTPADRLVRVLPAI
LPGLVHVAARSKKQETRLRVRVILERLLRKCGRDALEENFPQDHLKLLSAVRKKYSRDVI
KKHAAKDRKRQIGEFRNLKEVKAQEGSTEIEHDSFGIEDSDSDIERELIDGDDLRSSQRS
RAGGDRRKTLRTKESKDKVLNLLDEKDASAVLTGGGYMETAQQARSEQRNRRFSKTEDAT
EYTRDGRPIFVESDDESGEVGVGSANEDGEPDSDDEANEKRKQSFSKRKRRQPENESKNS
KRQKGSYGDEYKSKKASGDVKRAGRPDPYAYIPLGMNMLGANPRSRSAGNRKGNHGSSLQ
RLNAVKRKPTGNVVRSSGRR
NT seq
2583 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgagaaggctctggactccaacgacaggaagtcacaagacgttgcaaatggagtc
ttgtctgctattgttcgcggcggtggtgttgaacaggttctgaatacctgcgcgattcag
tacgacgagaagttgcatattactaacgcctgggtcttaccaattttgcgagacaatatc
tgcggtgcgcctttaagtctcttctcaaattccttcattccagtgattgaccaattgaag
gagaaaatcgttgccagaggcaaggaaggcagagtaatagaaatgaaaaacctgagcatt
tacgtatctcagttgtgggcgctgctcccaggattctgcaacaagccgacggatcttggt
catgacggagtgatgacctctgctttcaagtcaattcatctttgtttgtccacaaaggac
gagatgtccatacaacaagttgcagttgcagcgttgcggcaacttgcgttgtctcttcag
ggactgagcagtgaggatcccatgaccacagagaagagggagtctttcggaagtcgtctg
aagaagctctttccggcgattctcggtgcagccgaaactacctcccaggacagacgaaga
aatctccttgaagcggtgacgacatcttgccaagccacgaagaactcggggcttgtctct
gggcttctcagaaagagtatccgacgtttgttggagcttcaacttggttcgtctcccaag
agcccggatgcaatggtagatgatgaagaccatggaattcaacgacattatgccatggct
gatattgcgatagcagtgatcgaaagtggtaaggttccgcacgatgccgccgagttgaac
tatcttgagaaggccatgtctccgttcctccttgatgcaaagcaatcatctatgcaaaag
aaagcctatcgggcaatggcattgttggttggtgcgggctcggggtcttccgaatcggaa
gagttactctcagtcgccaagagagtagcagaagcaggctcaagagtagcaccgggagcg
aaagcagtgcggcaacacttattagtagcatacattaatcaacatgtgcgtttaattgga
gacgagaagaaggaatatctggccactctaactgagctgtttttgtctgagattgtgctc
gctacaagggacacatccgaaaagacgcgctcctccgcgtttgagactctcattacgctg
gctcgtgggtggaatagcgctggaactggaaatgatatgactggtctgcgcgaatttctg
gtggcggtttccgcgggcttaggaggaaggactgtatctatgctttccgcaactcttaca
agtttggggcgcatgatttacgagtttcgaggggaggcatctgcggatgataagcttgcc
aatcatgttgattctctctttgggtcagcagttaataatggtgcaaacgttgacatgtca
gggggagccgtggaccaggacgaggcagtccagagtgagagggtacttccaggtccgata
gccatcttgcttcgccatacttcgtttgaagttcagaaggcagccctgggcgttgtgaaa
atcgccactaaaaccctgtcaacgcctgcagatcgactagttcgtgtgttgccagccatc
ttaccaggacttgttcacgttgcggcccgttctaagaagcaagaaacaagacttagggtg
cgtgtgatcttggaacggctgctgcgaaagtgcggaagagatgctctagaagaaaacttt
ccgcaagaccatctgaagctgctttcggcagtccgcaaaaaatatagccgtgatgtaatt
aagaaacatgctgccaaagatagaaagcgacagattggcgaattcagaaatttgaaggaa
gtgaaggctcaggaaggaagcacagagattgaacacgacagtttcggcatcgaggattcc
gactccgatattgaacgggaattaattgacggggatgacttgaggtcatcacagagaagc
cgagcaggcggggatcgccgcaagaccctgcgtacaaaagaaagtaaggataaagttttg
aatttactcgacgaaaaggatgctagtgctgtcctcacaggtggtggctacatggaaact
gctcaacaggcacgatcggagcagaggaacagacgcttctcgaagactgaggatgccact
gaatacaccagagatggcaggccaatttttgtcgagagcgatgacgaaagtggagaggtg
ggagtcggcagtgcgaatgaagatggtgagcctgattctgacgacgaggccaacgagaag
cggaagcaatcattttcgaagaggaaacgacgccaacctgaaaacgaaagcaagaatagc
aagaggcagaagggttcatatggagatgagtacaagtcgaagaaagcatctggagatgtc
aagagagcaggtaggccggatccgtatgcgtatattccgttgggtatgaacatgttggga
gcgaatcctcgttcgcgatcggcgggaaatcgaaaagggaatcacgggtctagtcttcaa
agattgaacgctgtgaagagaaagccaacaggcaatgttgtcagatcttccggccggcgg
taa
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