Chondrus crispus (carragheen): CHC_T00002821001
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Entry
CHC_T00002821001 CDS
T02916
Name
(RefSeq) hypothetical protein
Organism
ccp
Chondrus crispus (carragheen)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MFS_1
Flavi_capsid
Motif
Other DBs
NCBI-GeneID:
17321663
NCBI-ProteinID:
XP_005713948
UniProt:
R7Q7X2
LinkDB
All DBs
AA seq
724 aa
AA seq
DB search
MALDTFPDLPQSATAQKRWSIAFTAALMNAIQSGSFFFTPTTLMPLIVADFGISLSLSTV
PIAVGKVAYVLLLIPGGIMVDHYGPRRCVLAGIFGLALIMTMYSLFVASFWSLLVSHILL
AAVASVSGVPVYSIFIAQWFEGGIGLAMGLVLAGYSAGGTLVPPLLGPIASACGWRVAMG
CMCSLLWFVGLPVSYFFLHEYGTSKQQIDPEDAQPLVDSVSAQSETSRLLPEEGHENVSY
GLPDTGMTDQRSWTFVGFAFSYILLQYCFGCFGENVMFFLTIDRGMSLGVASLFFSALNL
AAFTAKLVGGHLGDHFDRFHVASASSGIAAVGTMFLFLDTPGLDEDKVPSLTTHPVAMLT
FTVLFGFGYGATFNCLYALTPIVFGKQNLGQTQSTLFGLGLAGNAVGSVLTGVLRSKYGS
YERPFLIAGVACLANFFVFNVTRMTLGGSLEGFKTLNEEQETPSMTGTYHGIEELEAAED
EIRQRIGGYRSAGTSAKVSPKSSHPQLVKFGDFPSADFAPISSPVHERLRSSQSEHLAIG
KDVPVSPLSTSTSFMSHHRHNGTGMQIEHGYPIVRDWSNSSLRSYLGRTTSIDSNLASPK
ARPLRKSSTMEKIIESGILSASFEAVGYLGSGSSIRHPCRSPPSGSPPSGSPLPSLPRGL
PSLPNYGTAYGSPHFRLVSSDAAQSSQGDSTFVGALTPSIASMNTASGSRTNEDQRPKSE
STKE
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atggccctcgacacattccctgaccttccccaaagcgcgacggcacaaaagcgctggtca
atcgccttcaccgctgcgctcatgaacgccattcagtctggcagcttcttcttcacccct
accacactcatgcctcttatcgtcgccgacttcggcatttccctctccctctccactgtc
ccgattgctgtaggcaaagtcgcctacgtcctgcttcttatcccgggcggtatcatggtc
gaccactacggtccgcgccgctgcgttcttgcaggcattttcggcttggcgcttatcatg
accatgtattccttgttcgttgcttcgttttggagtcttcttgttagtcacatcttactc
gcagcagttgctagcgttagcggcgtgcctgtttattctatattcattgcccagtggttc
gaaggtggtatcggcctagcaatgggcttggtgctcgcgggatactccgcggggggtacc
ctcgtgccaccgcttctcggacctatcgcgagcgcgtgcggctggcgggttgcgatgggt
tgcatgtgctccttgctgtggtttgtcggcttgcccgtcagctacttcttcctccacgag
tacggcacatccaaacagcaaatcgacccagaggatgcgcaacccctcgtcgactcggtc
agcgcgcaaagcgaaacgtcacgtttactaccagaagagggccatgagaatgtctcatac
ggactgccagacacgggcatgactgatcagaggtcctggacctttgtcggtttcgccttt
tcctacatccttctgcagtattgctttggttgttttggcgaaaacgtcatgttcttcctc
actatcgaccgcggcatgtcactcggtgtcgcctccctctttttcagcgcgcttaatttg
gccgccttcacagccaagctggttggcggccatctcggtgatcatttcgatcgattccat
gtcgcttcggcgtccagtggaatagccgctgtcggtacaatgttcttgtttctggatacc
ccggggcttgacgaggacaaggttccttctttaacgacacatccggttgccatgctcaca
tttacagttctcttcgggttcggatacggcgcgacctttaactgtctgtatgcacttaca
ccaattgtttttggaaagcagaacctcggccagacgcaaagcaccttgtttggtctgggg
ctagctggaaatgctgtcggctccgtgcttaccggagtcctgaggtcaaagtatggttca
tatgaaaggccattcctgattgcgggcgttgcttgccttgctaatttttttgttttcaat
gtcaccaggatgacgctaggagggagtctagaaggattcaaaacgttgaacgaagaacag
gaaaccccaagtatgactggaacgtatcatggcatagaggaactggaagcagcggaagac
gaaatccgtcaacgcattggcggataccgcagtgctgggacatctgcaaaggtgtctccg
aagagcagtcatccccaactagttaaatttggcgacttcccaagtgctgattttgcgccg
atatcatcacctgttcacgagcggcttcgaagcagccaaagcgaacatctcgcaattgga
aaggacgtcccagtgtcaccactatcaacatccacgtcgttcatgagccatcaccggcac
aacggcaccgggatgcaaatcgaacatgggtatcccatcgttcgcgattggtcgaattca
tcactgcggtcatatctaggaagaacaacatcgattgattcaaacctagcatcgccgaaa
gctaggccgttgaggaagtcatcgacgatggagaaaataatcgagtctgggattctttca
gcaagtttcgaagcagtaggatatcttggttccggcagctcaattcgtcatccatgtcgc
agtcccccaagcggcagtcccccaagcggcagccctctgccgtctcttcccagaggactt
ccgtcactgccaaactacggcacagcctatgggtcccctcatttccgcttagtttccagt
gacgcggctcagagttctcaaggcgacagtacgttcgttggagccctgactcccagcata
gcctcgatgaatactgcatcgggctccagaaccaatgaggatcaaaggccaaaatcggag
tcgacaaaagaatga
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