Chondrus crispus (carragheen): CHC_T00002849001
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Entry
CHC_T00002849001 CDS
T02916
Name
(RefSeq) hypothetical protein
KO
K14309
nuclear pore complex protein Nup93
Organism
ccp
Chondrus crispus (carragheen)
Pathway
ccp03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ccp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
CHC_T00002849001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccp03019
]
CHC_T00002849001
Messenger RNA biogenesis [BR:
ccp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
CHC_T00002849001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nic96
Cul7
Motif
Other DBs
NCBI-GeneID:
17321721
NCBI-ProteinID:
XP_005714005
UniProt:
R7Q9V9
LinkDB
All DBs
AA seq
504 aa
AA seq
DB search
MADDIKDEGAPMTPGMLCTEAAHESLARLYAEEAWLSNDPYLRASIALLMRLEILHSYDD
VLEGTEGRMSSHSPGPTDQAHSLALPDEDIAGLLASVEDYLWFRLWLCRPPLEQEATLGQ
WTSNSDFVNLTEIQENMRVCGSKHFDPEGKQPLVYAFVLVCCGLHEEAVSYLTSHANEHL
MHAAVHIAIVLYQLRWIDDDMAFHAILARYISNFSRLFPTEAALYLMTLRDRDRLRQSLK
ELILETGEYELLTKGDGDGELLGALGKLPPRGKELPSGLTAADIENIRVDTAHVGALEAA
QRGEFAIAADLYKLSGELAESADMTMRNLAEVVDKQSSSRRAPAIAEAQKVLQSSCASNI
VATSIAALLKTSEFFEEYWKGRYQSAWDALRHTGVVPIAAADIANCRWDLAGSQAKFDHC
LQENTLQVLQLALNIAEVALEQNEVQHLDSPPRRGDNRPHEIRGNPPLPYRSEMKALCMF
AGCIQISDAVTSEKLIRIEMLLSR
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atggccgatgacattaaggacgagggcgcgccgatgactccggggatgctgtgtacggaa
gccgcccatgagtcgctagcgaggttgtatgcggaagaggcatggctttcgaatgaccca
tacttacgggcgtccatcgccctcctcatgcgactcgaaatccttcactcgtatgacgac
gtgctagagggaacggaaggtagaatgtcgtcgcactcgcccggacctaccgatcaggcg
cactcgttggcgttaccagatgaggacatagcgggcttgcttgcgtccgtcgaagactat
ctctggttccgcttgtggctttgtcgtcctccgctcgaacaggaagcgaccttgggccag
tggacctccaactcggatttcgtcaacttgacggagatccaggaaaatatgcgagtgtgc
ggaagcaagcactttgaccccgaaggcaagcagccacttgtctacgcatttgtccttgtg
tgctgtggtttgcacgaggaggctgtttcttacctcacatcccacgctaacgagcacctc
atgcacgcggctgttcacatcgccatagtcctctatcagctacgctggattgatgacgat
atggccttccatgctatacttgcgcgctatatctcaaacttttcgcgcttgtttccaacc
gaagcagcgctctacttgatgactttgcgggaccgagataggttgcgccagtctctgaag
gaactcatcctggagactggcgaatatgaactgctcacgaagggcgatggcgatggggag
ctactgggagcccttggaaagctaccgccgcgtgggaaagaactgccctctggtcttacc
gcagctgacattgagaatatcagggtagatactgcgcacgttggggctttagaggctgcg
cagagaggcgaatttgctattgcagcggatttgtataagttgagtggagaattggcggaa
agcgcagatatgaccatgaggaatctagcagaggtcgttgataagcaatcgtcttctcga
cgagctccagccatagcagaagcacaaaaggtgctacagagctcttgtgcttcaaatatt
gtcgcaacatccattgctgccctcttgaaaacgtctgagttttttgaagaatactggaaa
gggagataccaatcggcatgggacgcgctacgtcacacaggtgtcgtaccaattgctgca
gccgacattgcaaattgtcgatgggacctcgccggttcccaggcgaaattcgatcattgc
ctgcaagaaaatacacttcaagtgctgcagctggctctgaacattgcagaagttgcgcta
gaacaaaacgaagtgcaacatctagatagtcctccaaggcgcggagacaacagacctcat
gaaattagaggtaacccaccactgccctatcggtccgaaatgaaggccctgtgcatgttc
gctggatgcatccaaatatcagacgccgttacgagcgaaaagctcattcgcattgagatg
cttttgagccgatga
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integrated database retrieval system