KEGG   Chondrus crispus (carragheen): CHC_T00002866001
Entry
CHC_T00002866001  CDS       T02916                                 
Name
(RefSeq) hypothetical protein
  KO
K02325  DNA polymerase epsilon subunit 2 [EC:2.7.7.7]
Organism
ccp  Chondrus crispus (carragheen)
Pathway
ccp03030  DNA replication
ccp03410  Base excision repair
ccp03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ccp00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    CHC_T00002866001
   03410 Base excision repair
    CHC_T00002866001
   03420 Nucleotide excision repair
    CHC_T00002866001
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ccp03032]
    CHC_T00002866001
   03400 DNA repair and recombination proteins [BR:ccp03400]
    CHC_T00002866001
Enzymes [BR:ccp01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     CHC_T00002866001
DNA replication proteins [BR:ccp03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    CHC_T00002866001
DNA repair and recombination proteins [BR:ccp03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      CHC_T00002866001
SSDB
Motif
Pfam: DNA_pol_E_B
Other DBs
NCBI-GeneID: 17322032
NCBI-ProteinID: XP_005714315
UniProt: R7QAS8
LinkDB
AA seq 632 aa
MNGILTKDLAESIASRLQKDADRQVGMAAASIEVINTFTVPSWQSDTEPSTSGFGTQNRI
SAPPKPVIDGRPQSKAGMFRSRYELLLAKTLRNPQFRPPASGMLSMAKSSPYYQLTGIES
LAGSKDEKLVLGMLTQLEEGSWFLEDLNGSVKLDLSEASVTAGLHTECSFAIAQGHLIET
PNQESIFHVSAMGTPPLEKREESLNAMSKNPNLFGGHFEASETAQLLKLEKEAVDTMFLL
LSDVALDNSRVMAGLKHMFTGYIEDGALPKLVVLMGNFLSHPFGQHVDDVMTLTEKFTEL
GTAIAADFSPLLEECVFVVVPGMNDPGPGNVLPRPPMPKTVMKGFIDAVGSERVHLATNP
CRLRYMTQEIVILRDDLMQKMIRHCSVKPEFGESGSMSEHFVKSVVDQSHLCPLPNSARP
VLWRHAHALWLFPVPHVVVLADKTDGYICKYGGTLGLNPGSFATDFSFQVYLPAQKRAQQ
SSVNSEEILDKTENAIHQSDQECVSDRGDSDDDASGDDNSTEEVDMHIGGIAMDTDGEGL
PLPGQPLDKDEAGNSDAMLDDISAGAEDGGEDEGKHLSDDDMGASESESDDDSVLIPLDA
LPKRDIKAMLRQAVASDDSGEPKKDASRSGEN
NT seq 1899 nt   +upstreamnt  +downstreamnt
atgaatggaatcttaaccaaggacctggctgagtctattgcttcaaggctgcaaaaagat
gcggatagacaagtgggcatggctgcggcgagcatcgaagtcatcaacacgtttactgtt
ccgagctggcagtcagacacagagccatcgacgagtgggtttggcacccagaatcgaatt
agcgccccgccaaagcctgtcattgatggcagaccgcaatctaaagcgggtatgttccgc
tctcgctatgaacttttgttggccaaaaccctccgcaatccgcaattcagacctccagct
tctggtatgttgtctatggcgaaaagcagcccatactaccagttgactgggatagagagc
ttggcagggagcaaggatgaaaaacttgttctcggaatgttaacgcaacttgaggaaggc
tcttggttccttgaagacctcaacgggtccgttaagctagatctatcggaagcgagtgtt
acagcagggttgcacacagaatgcagttttgccatcgcccaagggcatttaatagagact
ccgaaccaggaatctatctttcatgtgtctgccatgggtacgccaccccttgagaagaga
gaggagtctttgaatgcgatgagtaagaatccaaatctttttggtggtcatttcgaggcc
tctgaaactgcacagctattgaaattggaaaaagaagcagtagatacaatgtttttactc
ctctctgacgttgcgctggacaactcgcgcgtcatggctggtctcaagcacatgtttacc
ggttatattgaagatggtgcattgcccaaacttgtcgtcttaatgggaaactttctctca
catccgtttggccagcatgttgacgatgtgatgacactgacagagaaattcaccgagctt
ggaacagcaatagccgcggatttcagccctctcctcgaagaatgcgttttcgtagttgta
ccgggaatgaatgatccgggtccaggcaatgttcttcccagacctcctatgccaaaaaca
gtaatgaaagggtttattgatgctgttggaagcgagagagtgcacttggcaacaaatccg
tgtcggttaaggtacatgacgcaagagattgtaattttgcgggatgatctcatgcaaaaa
atgatccgacattgctcagtgaaaccggagttcggagaatcggggtcaatgtcagaacat
ttcgtcaagtcagttgttgaccagtcgcatttgtgtcctctgcccaactctgctcgtcct
gtactgtggcgacatgcccatgctctatggcttttcccggtccctcatgttgttgtgctg
gctgacaaaacggatggctatatttgcaagtatggtgggacattggggttgaatcctggt
tcttttgctacagacttttcctttcaagtgtatctccctgctcaaaagagggcccagcaa
agctctgtgaacagcgaggaaattcttgataagacagaaaatgcaatccaccagtctgat
caagaatgtgtatcggatcgtggagatagtgatgacgatgccagtggggacgataacagt
actgaagaagttgacatgcacattggtggtattgctatggatacagacggagaggggttg
ccccttccgggacaacctttagacaaagacgaagcaggcaattcagacgccatgctggac
gatatttcggctggagcggaagacggcggggaagacgaaggcaagcatctttctgatgac
gatatgggagcgtcagaatccgagtcagatgacgatagcgtcctaatacctctggatgct
ctaccaaagcgtgatatcaaggccatgcttcggcaagctgttgcatctgatgattccggt
gaaccaaaaaaagacgcatcacgttcaggagaaaactga

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