Chondrus crispus (carragheen): CHC_T00002964001
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Entry
CHC_T00002964001 CDS
T02916
Name
(RefSeq) hypothetical protein
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
ccp
Chondrus crispus (carragheen)
Pathway
ccp03440
Homologous recombination
ccp03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ccp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CHC_T00002964001
03460 Fanconi anemia pathway
CHC_T00002964001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ccp03032
]
CHC_T00002964001
03400 DNA repair and recombination proteins [BR:
ccp03400
]
CHC_T00002964001
Enzymes [BR:
ccp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
CHC_T00002964001
DNA replication proteins [BR:
ccp03032
]
Eukaryotic type
DNA Topoisomerases
CHC_T00002964001
DNA repair and recombination proteins [BR:
ccp03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
CHC_T00002964001
FA (Fanconi anemia) pathway
CHC_T00002964001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Motif
Other DBs
NCBI-GeneID:
17321812
NCBI-ProteinID:
XP_005714096
UniProt:
R7Q6W3
LinkDB
All DBs
AA seq
942 aa
AA seq
DB search
MVLRVLNVAEKPSAAKEIANVLKAGQQCETRPGLSRFNQIYDFDMNLAGNRARMSFTSVL
GHLKGTDFEDRVRKWGSCDPVDLLDRSRTKVEWFVPEDKQPIAETLRRESRRADWLVLWL
DCDSEGEKIAFDVADVCKQGKPSIVVRRARFSAMTHGDLFRAVAQLGEPNERVAQMVSTR
QEIDLRAGSAYTRFLTIQLEKFSLVGDDERQIVSYGPCQFPTLGLVVDRWLKIQNFVRRP
FWVFDLFVKDCKVQFDWARKHLFDEYTSMALYELCIEEAEQDGMMVSVTRVDKRMKNRWR
PLPLSTVELQKVASRSLRISSHRAMEVAESLYNKGLISYPRTETDRFDKSYNLRDLVGKQ
VGHLDWGPFASRLLSPPSEEDALAFTWPRSGSNDDGAHPPIHPTDVAPARFESTDHQKIY
EYITKRFLAACSIEARASETRVEVRAGTSEFFTARGLIIEEKGYLEVMYPFEKWTDKDMP
VALLHVNAKLLIDSLMLRQSQTQPPPLLQESDLIALMDHHGIGTDATIAEHIKKVLDRSY
VEKVRGGGFSPTQIGQALVIAHEQCQLHLARPDMRAKQERQLKQILTSEMEPADVLTNAL
SEYQSKFRHLRQNRDVLDTVFSERFQAVTARTWATLIPQFSRCGACSQLMDLKCSHSSNG
GGRGQATSRGHGRGRRRAQAHASVRQEGADRALDCIPCNKTLKVPRNGNLERSQHECPIC
RYQVISVTNSTSNSTHTVCPMCMNNPPPEPGFNPEGKTSEFRCFNCTNSQCRLARGTPAG
LSDVAKCPKCGRPCALRETSSGSRLVSCTAGRGNCDFVYFFPRNSVERLGRANGSCERCG
SAVLEVFFSSAARPPGAPQCFKGCIWCDSRYESALRALGEDRDVPRHPNPGSRFGGRRGR
GQGYNLRGGGHGFSGVDIEGRGRGGVRGGQHGRGQSGIRFPR
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
atggttttacgagtattgaacgtcgcggagaaaccatcggctgcgaaagaaatcgcaaat
gttctcaaagctggtcagcaatgtgagacaaggcctggcctgtctcgcttcaatcagata
tatgactttgacatgaatctagcagggaatcgtgcgcgtatgtcattcacttcggtgctt
ggtcatctaaaaggtactgacttcgaagaccgggttcggaaatggggttcatgcgatccg
gttgatctgctggatcgaagtcgcacgaaagtagaatggtttgttcctgaggacaaacaa
ccgatcgcagaaacacttcgacgggaatcacggcgtgcagactggctggttctttggctc
gattgcgattcagaaggagagaagattgcattcgatgtggccgatgtctgcaagcaaggg
aagccgagcattgtcgtgagacgtgcaaggttctctgcgatgactcatggtgatcttttt
cgtgctgtggcgcaactaggtgagccaaacgaaagagttgcgcagatggtatcgacgaga
caagagattgatttacgcgccggctccgcgtatacccgcttcctcaccattcagcttgaa
aaattttccctggtcggagatgacgaacggcagattgtgagttacgggccttgccaattt
cctacactggggctagttgttgaccgctggctgaagatccaaaatttcgtgaggaggccg
ttctgggtctttgacttattcgtgaaggactgcaaagtgcagtttgattgggcaaggaaa
catctttttgatgagtacacatccatggctctttatgagctttgcatagaagaagctgag
caggatggtatgatggtctcggttacccgtgtggataaacggatgaagaaccggtggaga
ccattgcctttgtcgacggtcgagcttcaaaaagttgcctcacgaagcctgcgaataagt
tcacatcgcgccatggaagttgccgaatcgctctacaataaaggactcattagctaccca
cggacagagacagaccgcttcgacaaatcatataacctgagggatctcgtggggaagcag
gttggccatctagattggggaccgtttgcttcccggctactgtcgcccccgagtgaagaa
gatgcgttagctttcacatggcctcgttcggggagcaatgatgatggtgcacaccctcct
atccacccaacggatgtggctccagccaggttcgagtccacggatcatcagaaaatctat
gagtacatcacaaagcgatttctcgctgcatgctctatcgaagcaagggcttcagagacg
agagttgaagttcgagcaggtacctcggaattcttcacggctcgaggactgattatcgaa
gaaaaggggtatttggaagtcatgtacccttttgagaagtggacagacaaggacatgcca
gtagctctactgcacgtaaacgcgaagttactaattgactctttgatgcttcgccagagt
caaactcagccacccccgttactgcaagagtcagacttaatcgcattgatggaccaccac
ggaattggaacagacgctacgattgccgaacacattaagaaagtgttggatcggagttac
gtggagaaggtgcgcgggggagggttctcaccaacacaaattggacaggctctggttatt
gcacatgaacagtgtcagctacatctggcgcgcccggacatgcgagcaaaacaggaacgg
caactcaaacagattttgacgtcggagatggagcctgccgacgttctcacaaatgccctc
tccgagtatcaatccaaattccgacatcttcgtcaaaaccgagacgttttggataccgtt
ttcagtgagcgttttcaagccgtcactgctcgcacatgggctactcttatcccccaattt
tctcgatgtggagcttgcagtcagctcatggacctaaaatgctcccacagcagtaacggt
ggtggacgtggacaagccacatcgaggggacacggtcgaggaagaagacgggcccaggca
catgccagtgtgagacaagagggagcagaccgagccttggactgcattccatgcaacaag
acgctgaaagttccccgcaatggtaacctggaacgctcacagcatgaatgcccaatatgt
aggtaccaagtaatttctgtcactaactccacaagtaactcaacacataccgtatgccct
atgtgcatgaacaatccgccccccgagcctggtttcaatcccgaggggaaaacttcagaa
ttccggtgctttaattgcaccaacagtcaatgtcgccttgcccggggaacgccagcagga
ctctcagatgtagccaagtgtccaaaatgcggacggccgtgcgctttgcgggaaacatca
tctggaagcagattggtatcttgtactgcggggcgtggaaattgcgatttcgtctacttc
ttcccacgcaactctgtcgaacgccttgggcgtgcaaatggatcctgtgagcgctgcggc
tctgcggtgctggaggtttttttctcgtcagctgcacgacccccaggagcaccgcaatgt
ttcaagggctgcatttggtgcgattcgcgctacgagagcgctttgcgtgcattaggtgag
gatcgtgatgtgccaaggcatccaaatcctgggagtaggttcggcgggcggcgtggtagg
ggtcaagggtacaacttaagaggcgggggacatggatttagtggagtcgatatcgaaggc
cgcggccgtggtggggttcgggggggccaacacggaaggggacaatctggaatccgtttc
ccccgatga
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integrated database retrieval system
