Chondrus crispus (carragheen): CHC_T00003331001
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Entry
CHC_T00003331001 CDS
T02916
Name
(RefSeq) hypothetical protein
KO
K03008
DNA-directed RNA polymerase II subunit RPB11
Organism
ccp
Chondrus crispus (carragheen)
Pathway
ccp03020
RNA polymerase
ccp03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ccp00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CHC_T00003331001
09124 Replication and repair
03420 Nucleotide excision repair
CHC_T00003331001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccp03021
]
CHC_T00003331001
03400 DNA repair and recombination proteins [BR:
ccp03400
]
CHC_T00003331001
Transcription machinery [BR:
ccp03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
CHC_T00003331001
DNA repair and recombination proteins [BR:
ccp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
CHC_T00003331001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_L_2
RNA_pol_L
Motif
Other DBs
NCBI-GeneID:
17322535
NCBI-ProteinID:
XP_005714822
UniProt:
R7QB84
LinkDB
All DBs
AA seq
127 aa
AA seq
DB search
MASDLVHALTTNHLLFPIQHLVANSCSKRLEYVQDTKLYNSGTFKLEREDHTMGNLIRMQ
LMRDPDVIFVGYKHPHPYEHHILLRVQTTTRPSVGGTYLPPDAFKTALQDLAAEVSTLSE
QLRSQLH
NT seq
384 nt
NT seq
+upstream
nt +downstream
nt
atggccagtgatttagtgcatgctctgacaacaaatcacctcctttttccaatacaacat
cttgttgcaaactcgtgctcgaaaagactcgaatacgtccaggacacgaagctgtacaac
tcgggaacattcaagctggagcgcgaggaccatacaatgggaaacttgatacgaatgcag
ctaatgcgagatccagatgtcatattcgtgggctacaagcacccccatccttacgaacat
cacatactgttacgagtacagacgacaacgaggccgtcagttggcgggacttacttaccg
ccagatgcgtttaaaaccgcgctacaggatttggcggcagaagtctcgacgctgtcggaa
caattgaggagccagctgcattaa
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