KEGG   Chondrus crispus (carragheen): CHC_T00003331001
Entry
CHC_T00003331001  CDS       T02916                                 
Name
(RefSeq) hypothetical protein
  KO
K03008  DNA-directed RNA polymerase II subunit RPB11
Organism
ccp  Chondrus crispus (carragheen)
Pathway
ccp03020  RNA polymerase
ccp03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ccp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    CHC_T00003331001
  09124 Replication and repair
   03420 Nucleotide excision repair
    CHC_T00003331001
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ccp03021]
    CHC_T00003331001
   03400 DNA repair and recombination proteins [BR:ccp03400]
    CHC_T00003331001
Transcription machinery [BR:ccp03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Core subunits
     CHC_T00003331001
DNA repair and recombination proteins [BR:ccp03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      CHC_T00003331001
SSDB
Motif
Pfam: RNA_pol_L_2 RNA_pol_L
Other DBs
NCBI-GeneID: 17322535
NCBI-ProteinID: XP_005714822
UniProt: R7QB84
LinkDB
AA seq 127 aa
MASDLVHALTTNHLLFPIQHLVANSCSKRLEYVQDTKLYNSGTFKLEREDHTMGNLIRMQ
LMRDPDVIFVGYKHPHPYEHHILLRVQTTTRPSVGGTYLPPDAFKTALQDLAAEVSTLSE
QLRSQLH
NT seq 384 nt   +upstreamnt  +downstreamnt
atggccagtgatttagtgcatgctctgacaacaaatcacctcctttttccaatacaacat
cttgttgcaaactcgtgctcgaaaagactcgaatacgtccaggacacgaagctgtacaac
tcgggaacattcaagctggagcgcgaggaccatacaatgggaaacttgatacgaatgcag
ctaatgcgagatccagatgtcatattcgtgggctacaagcacccccatccttacgaacat
cacatactgttacgagtacagacgacaacgaggccgtcagttggcgggacttacttaccg
ccagatgcgtttaaaaccgcgctacaggatttggcggcagaagtctcgacgctgtcggaa
caattgaggagccagctgcattaa

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