Chondrus crispus (carragheen): CHC_T00003366001
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Entry
CHC_T00003366001 CDS
T02916
Name
(RefSeq) hypothetical protein
KO
K19513
protein CLEC16A
Organism
ccp
Chondrus crispus (carragheen)
Brite
KEGG Orthology (KO) [BR:
ccp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccp04131
]
CHC_T00003366001
03029 Mitochondrial biogenesis [BR:
ccp03029
]
CHC_T00003366001
Membrane trafficking [BR:
ccp04131
]
Autophagy
Mitophagy
PINK1-Parkin associated proteins
CHC_T00003366001
Mitochondrial biogenesis [BR:
ccp03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
CHC_T00003366001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FPL
Motif
Other DBs
NCBI-GeneID:
17322198
NCBI-ProteinID:
XP_005714484
UniProt:
R7QB27
LinkDB
All DBs
AA seq
953 aa
AA seq
DB search
MRRFFNFVAGDGPPQPDAADAGSLEPVPSFEEDKESFERATALSRSIEPGSAQNTPTLSP
RVSQHSDTDERQPHVDSPPANPAFDRPPDSPLSTASESPAINAALRLRGVVTVVQAYVDE
TADSVLTVQVVEALKDLAEIMVWADQHDPDVWDVFLELSVMPLLVRCLQVSVKPQSAFAE
SQASEMDPIVTANELALESQGDGEEKDSDEDREFSTIAPGNDNRTAVVGSQPNGTSAEGL
TNSSVGMSGRQSSALSFTSSIVEAESSHTERKIGEAAEEVDNQEHYALTNDGTEVQAQIL
QTLSIVIQSVSRQESLLCLFSSNHINQILSFEFAFEHDEMLAYFISAVKSIALKLDEGLV
QLFFDPGKGSFPLYTAVTKFFDHPEAMVRIAMRNVTLTIYALGDSEVLRFAAKDEAQYFP
NTMELLARLCGSVGRAFEFLLDDGREVRRTRSRTGLFRRRVKLSELTAKLEEIENISAYL
GDVSTVSQSYLHPLVVSLISKRVFSPFFRPIASQASPASLHLLRKQWGLTRADAETDTKP
ALPLFDAAARALVLTCMLTHCKASPLGSVLVRDLCRPTSDFEHRHVLHGLKGMATNIKGT
ERVTFVSLCAIEAFISCEAASKQLLGSLKYDLFLEDIDEIDEFFADSPFKSFINIGIPDE
DDLQRRGSEPLLMTLSDFEAPLTPTGSRPSTPTLPSNPSFDGMKTPPSGLFDSRFSSTDS
SPGFHLSPPADIAPAIERSDSDGILSSFQFGETSLREALSSIVLVVRRREVRTTRVLHAI
YRIISAVYKRTSDINSSVDVTKIMLDELAGVIHGFMKNKRTTIVAIEQMFDNFVAAAKDD
DIHPQECMDLESIVSPDQLPSFASAFPNGAGKRRRVHLEDATPPIEVQDAQTFCILGNIY
DDMLRAGKILGRLGSLSERVLQILTADGVDDSYLDKRDALEQVSEAVLKHGES
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atgcggcgcttcttcaatttcgtcgcgggcgatggccctccccaaccggacgccgctgat
gcaggttcgttagaacctgtgccatcctttgaggaggacaaagaaagctttgaacgagca
acggctctgtcgcgctccatagagcctggctccgcgcagaacactccaactctgtctcca
cgagtttcacaacattccgacactgacgaacgccaaccgcatgtcgactcaccacctgcc
aacccggcttttgacagacctccggattctccgctttccacagcgagtgagagtcccgct
attaacgctgcactacgactgcggggagtcgtaactgtcgtgcaagcgtatgttgatgag
accgccgatagcgtcctgactgtgcaagttgttgaggccctgaaagatctggctgagatc
atggtctgggcagatcagcacgacccagatgtgtgggatgtgttccttgagctttctgtg
atgccgctgctggtgcgctgtctacaggtcagtgtgaagcctcaatcagcttttgcagaa
tctcaggctagtgagatggatccaatcgtcaccgcgaacgaactagcattagaatcacaa
ggggacggcgaggaaaaagatagcgacgaagacagggagttttccaccattgcccctggt
aacgataatcgtacagctgtggtgggatcacaaccgaacgggacatctgctgaagggttg
acaaattcctctgttggcatgtcgggtcggcagtcttcagctctatcatttactagttca
atcgtggaagccgagtcgagtcacaccgagcggaaaattggtgaggctgcagaagaagtg
gacaatcaagagcactatgcattgaccaacgacggtactgaggttcaggcacagatattg
cagacactatctattgtgattcagagcgtgtcgcggcaagaatctcttctgtgcttattt
tcttcaaaccacatcaaccagattctttcatttgaatttgcgtttgaacatgacgagatg
ttagcttacttcatttctgccgtcaaatccattgccctgaagctcgacgaaggtttggtt
cagcttttcttcgatcctggaaagggctcatttccattatacaccgccgtgaccaaattc
tttgatcacccagaagcgatggtccggattgcgatgcgaaatgtaacactcactatttat
gcacttggggattcggaagtcttacggtttgcagccaaagacgaagcgcagtatttcccc
aataccatggaactgctggctaggctgtgtggtagcgttggcagggcatttgagttttta
ctggacgatgggagggaagtgcgaaggacgagaagtcggactgggctttttcgacgacgt
gttaaattatctgagcttactgccaagctcgaggaaattgagaacatctctgcgtatctt
ggcgatgtgtctaccgtttcgcaatcgtatcttcaccctctggttgtcagcctcatcagc
aagcgggtgttcagcccgtttttcagaccaatagcgtctcaggcatctccagcttctttg
cacctactgcgaaaacagtggggcctaaccagggcagatgcagaaacagatacaaaacca
gctttgccacttttcgatgcggcggcgagagctttggtgttgacatgcatgctgactcac
tgcaaggcctcaccacttggtagtgttcttgtacgagacctttgcagacctacgtctgat
tttgaacatcgtcacgttctacatggtctcaagggtatggctacaaatatcaagggaact
gagcgcgtcacatttgtctccctttgtgcgattgaggcattcattagttgtgaggctgcg
tcgaagcaattattgggaagtttgaagtacgatttatttctcgaagatatcgatgaaatc
gacgaattctttgcagacagcccattcaagagctttattaacattggcattccggatgag
gatgatctacagcgtcgtggatcggaacctctgctcatgactttatctgattttgaggcc
cctctgactccaacgggttcacggccttctactccgacgctgccaagcaacccttccttt
gatgggatgaagaccccaccaagtggacttttcgactcccgattctccagtacggacagt
agcccaggtttccacttgtccccacccgccgacatagcaccagcaatagagaggagcgat
agcgacggtattttatcttcctttcaattcggggaaacctcgttgagggaggcgttgtct
tcgatcgttctagtggtgagaaggcgagaagtgaggacaacccgggtgcttcacgcgata
tatcgcatcatttcagctgtatataagagaacgtcagatatcaactcatctgttgatgta
acgaagatcatgctggatgagcttgccggcgtaattcacggattcatgaaaaacaaacgg
acaactattgtagcaattgaacaaatgttcgacaattttgttgcagcggcaaaggatgac
gatatccacccacaggagtgcatggatcttgaatccatcgtatctccggatcagctgccc
tcttttgcatcagcattcccgaacggagcgggaaaacgtcgacgggtacacttggaagat
gcaacccctcccattgaagtgcaggatgcccagactttttgtatactggggaatatatac
gatgacatgctccgggcaggaaagattctgggaagattggggagtttatctgagcgcgta
ttacaaatactaacagcagatggagtggatgactcgtatctagacaaacgcgacgcttta
gaacaggttagtgaagccgtcctgaaacacggagagtcgtag
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