Chondrus crispus (carragheen): CHC_T00003412001
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Entry
CHC_T00003412001 CDS
T02916
Name
(RefSeq) hypothetical protein
KO
K15176
RNA polymerase-associated protein CTR9
Organism
ccp
Chondrus crispus (carragheen)
Brite
KEGG Orthology (KO) [BR:
ccp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccp03021
]
CHC_T00003412001
Transcription machinery [BR:
ccp03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
CHC_T00003412001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_16
TPR_19
TPR_11
TPR_17
TPR_6
TPR_12
TPR_2
TPR_9
TPR_Slam
TPR_8
Exo70_N
TPR_10
HrpB1_HrpK
Motif
Other DBs
NCBI-GeneID:
17322888
NCBI-ProteinID:
XP_005715176
UniProt:
R7QA03
LinkDB
All DBs
AA seq
751 aa
AA seq
DB search
MALFQLGRAEHHLGKFEEASQRLEEAKKISERSDNAYVKLNPGLFLRLGLLKLSTQRKED
EDLAQECLEKVIKDSNDRCGVARRALGVLIGRRLLIGIKRGRPRGGEVFHRAVSLLKRGL
AENEGAKADVPAQLTYAGLIEENSPKLALEAYQSAIRALEGEKTPVDAEIWNNVASLNAR
LGDVSAAKTMMHEKIDAEYSAECSTISYNRGRIAEMAGALKEAESTFRAIKKDAPHYLEA
ITRLAVITMQDETKLKEAEELLREAMGSPASKSVAAAFLSKLYAKQKDFKEAQTVLEINR
NECDYLALAFSSFMHRFLDSLDQERKSRFLLNHIGAPLVSILKRSKHNSFAANGVGVYFA
ESKMMSEARDAFTAAGTGVFTAKTARVNLAHTQVHLGHRAISESARVTGRPSHKVVSNSR
ALFEQAEKLYQDAFELSRLSKSKADFDAHCELLLYTAWAQFEATQYRKSADTLTKLVHLV
PSNAVVWFNLGQALLESASTRALRGKTMLEEMKMAKVEFTASRQALRRSIALDRHHTDAL
TRSQFETKHATALDKYVHQQDRTHEVNLRNATNEAEDREERRRHSLALLEARQKKHEEEA
RKEMDKQRQKEEELRKAFQDSEAKKQRFKEEHDRTLAEEARFEDEDEEYSGEQGSSRKGR
SKRKKKEELLIEDEKPAKKAKKQKKGTIAKKKDADDSGSEYSDAAADSGKEGENGVELSR
GDESEGEGDRKPSEQKRFALTVDDDDSDGDL
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
atggctttatttcaactggggcgtgctgagcaccatttggggaagtttgaagaagcatct
caacgactggaggaggccaagaagatttctgaaagatctgacaatgcctatgtcaagctt
aatccgggactgttcttacgtctaggacttttgaagctatcaacacagcgaaaagaagac
gaggatttggcgcaagaatgcctcgaaaaagtaatcaaagactcgaatgatagatgcggt
gttgcgagaagagcgctgggtgtgctgattggtagacgactcctcatcgggattaagcgt
ggtcgtccgcggggaggtgaagtgttccatagagcggtctctcttctaaagcgagggctc
gctgagaacgaaggggcgaaagcagatgtgcctgctcaacttacttatgcggggctaatt
gaggaaaactcaccaaagctggcattagaggcgtatcagtccgcgatcagggctcttgag
ggggaaaagacccctgtcgatgctgagatttggaataatgtggcatcccttaacgcacgt
ctcggggatgttagcgcagcgaaaacaatgatgcacgagaagattgatgcggagtatagc
gcagagtgctccacaatctcatacaatcgaggtagaattgcagaaatggctggggccctg
aaagaggcagaatcgacttttcgggcgattaagaaggatgctcctcattatctggaggcc
attacaagactagccgtcatcaccatgcaagatgaaacaaagttgaaagaagcagaagaa
cttttgagagaagccatgggatcgcccgcaagcaagtcggttgctgcggcgtttctgagc
aagctttatgcaaagcagaaggattttaaggaagcgcaaacggttctagagattaatcgt
aatgagtgcgattatctggcgttagcgttctcaagttttatgcaccgcttcttggatagt
ttggatcaagaacgaaaatcacgcttcttgttaaaccatataggggcaccccttgtgtcg
attctgaaaaggagcaaacacaattcgtttgcggcaaacggcgtgggcgtgtactttgct
gagtcaaaaatgatgtcggaggctagagacgcgttcacagcagccggtaccggcgttttc
actgcaaagactgcgcgggtaaatcttgctcacacgcaagtgcacttgggtcatcgcgcg
atcagcgagtctgcgcgagtcacaggacgtccaagccacaaggttgtgtcgaactcacgg
gcactatttgaacaagcggaaaagctttatcaggacgcctttgagctcagtcggctgtca
aagtcgaaggcggattttgatgcgcattgcgagctgttgttatacaccgcgtgggcgcag
tttgaagcgacacagtaccgcaagtctgcggatactttgacaaaactagtgcacttagtg
ccgtctaatgcggtggtgtggttcaacctcggtcaagctttgcttgagtctgcgagcact
cgggctctacgagggaaaacaatgctggaagaaatgaaaatggctaaagtggaatttaca
gcaagcagacaagcgttgcggagaagcattgcgttagacagacatcatacagatgccctg
acaaggtcgcaatttgaaacgaaacatgcaactgcactcgacaaatacgtgcaccaacaa
gacaggacgcatgaggtgaacctgaggaacgcgacaaacgaagcggaagatagagaagag
cgaagacggcatagtcttgctcttcttgaggcgcgacagaagaagcatgaggaggaggcg
agaaaggagatggacaagcagcgacagaaagaggaggaattgcggaaagcgttccaagat
tcagaagccaaaaagcaacgatttaaggaggagcacgatcgaacgctggcggaggaagca
aggtttgaggatgaggatgaggaatatagcggggaacaaggatcgtcgcgaaaaggtcga
tccaagcgaaagaagaaggaggagttgttaatcgaggacgaaaaaccggctaagaaagcc
aagaaacagaaaaaggggacgattgcaaagaaaaaggatgccgacgactctgggagcgaa
tattctgatgcagctgcggacagtggaaaggaaggcgagaacggggtggaattgtcacgg
ggagatgaatcggagggagagggcgatcggaagccgagcgagcaaaagaggtttgcgcta
acggtggatgacgatgattccgatggagatctttaa
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integrated database retrieval system
