Chondrus crispus (carragheen): CHC_T00003719001
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Entry
CHC_T00003719001 CDS
T02916
Name
(RefSeq) hypothetical protein
KO
K14801
pre-rRNA-processing protein TSR4
Organism
ccp
Chondrus crispus (carragheen)
Brite
KEGG Orthology (KO) [BR:
ccp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ccp03009
]
CHC_T00003719001
Ribosome biogenesis [BR:
ccp03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
CHC_T00003719001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDCD2_C
Motif
Other DBs
NCBI-GeneID:
17322359
NCBI-ProteinID:
XP_005714631
UniProt:
R7Q8E4
LinkDB
All DBs
AA seq
396 aa
AA seq
DB search
MTNDPYILGFASEQPFDSASASWYDTHIGGLPIWPPALEVAIPDCPLCDAKRVLVLQAYA
PHWNHPERLVCVFGCNSIQCSANVQAWWAVRVCRVQAEKGPAIELAEGSAGVAQVSAEEE
EIQWDTDSDSDNSSDEGGSVKDLGLLSLEVELATARKAASASGTPAKPSSRRSPSKPLKR
DRHGTQNALKATGRKEGSLHSVPISASAPEINAPSHRETCASYYVEVDYEPQEAAPLVED
SSIDALLQKYKDEEHSRAATGTFEEWTAEKENDNETAGLRNQEDFLQTIARAPSQILRYK
LGGKPLWPSHPAPQLDTNETCECGAPLMFELQLLGSSLHFLKPEESVPRHQAEAGMNFAS
IAIFTCENDCTKIDTVAENGEFKVLRQSVCIQQDDW
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgaccaacgacccctacatcctcggctttgcttcggaacaacccttcgactccgcctcc
gcctcatggtacgatacacacatcgggggcttgcccatctggcccccagctctcgaagta
gctattcctgactgccctctgtgtgacgccaagcgtgtgctggtgttgcaagcctatgcg
ccacactggaaccacccggagcggctggtgtgtgtcttcgggtgcaactcgatacaatgc
tcagccaatgtgcaggcgtggtgggctgtacgtgtttgtcgtgtacaggcggagaagggc
ccagcgattgagcttgcggaaggcagcgctggggtagctcaggtttctgccgaggaggag
gaaattcagtgggatacggactctgattctgacaattcgtctgacgagggaggttcagtc
aaagatttgggtttactatcactcgaggtggagctggcgacagcgagaaaggcagcgtct
gcgtcagggacgcctgccaaaccgtctagtcgccgctctccttccaagccgttgaagcgg
gaccgccatggaacgcagaacgcgttaaaagccacaggccgtaaagaaggcagcctacat
tctgtccccatctctgcatcggcccccgaaattaatgcaccgtctcatcgagaaacctgc
gcttcttactacgtcgaagtcgactacgagccacaggaagctgcgccgctggtcgaggat
tcctcaattgatgcgttattgcaaaaatacaaggacgaagaacattcgagggcagccact
ggcacttttgaggaatggacagcagaaaaagagaatgacaatgagactgctggactacga
aatcaggaagactttctacagacaatagcccgtgccccctcccaaatcctgcgctacaag
cttggcggcaagcccttgtggccttcacatccggccccacagcttgacacaaacgaaact
tgtgagtgcggcgcgcccttgatgtttgaattgcagctgctcggctcaagtcttcatttc
ttgaaacctgaagaatcggtgccgcggcatcaagcggaagccggcatgaattttgcttca
attgccatttttacatgcgagaacgattgtactaaaattgacacggtagcggaaaatggt
gagttcaaagtattaaggcagagcgtttgtatacagcaggatgactggtag
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