Chondrus crispus (carragheen): CHC_T00003774001
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Entry
CHC_T00003774001 CDS
T02916
Name
(RefSeq) hypothetical protein
KO
K11338
RuvB-like protein 2 [EC:
5.6.2.3
]
Organism
ccp
Chondrus crispus (carragheen)
Pathway
ccp03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ccp00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
CHC_T00003774001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccp03036
]
CHC_T00003774001
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ccp03037
]
CHC_T00003774001
Enzymes [BR:
ccp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
CHC_T00003774001
Chromosome and associated proteins [BR:
ccp03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TIP60 complex
CHC_T00003774001
Chromatin remodeling factors
SRCAP complex
CHC_T00003774001
INO80 complex
CHC_T00003774001
INO80 complex (yeast)
CHC_T00003774001
SWR1 complex
CHC_T00003774001
ASTRA complex
CHC_T00003774001
Cilium and associated proteins [BR:
ccp03037
]
Motile cilia and associated proteins
Dynein assembly factors
CHC_T00003774001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TIP49
TIP49_C
DnaB_C
AAA
AAA_5
AAA_16
AAA_19
NACHT
AAA_22
Mg_chelatase
AAA_25
ATPase
nSTAND3
SLFN-g3_helicase
AAA_7
Zeta_toxin
AAA_11
CbiA
Motif
Other DBs
NCBI-GeneID:
17323213
NCBI-ProteinID:
XP_005715490
UniProt:
R7QDZ4
LinkDB
All DBs
AA seq
474 aa
AA seq
DB search
MDRLHQVYMIILTDTRWVLFGYSGIAFQSVDPFQPDSVGYLIPYCVLQHFVDHIACHGQY
AGFSFCIFRWQRMETHHLRRSLGTAKDQSGILVKWVAEICEANRMLRKGDIMTRVDGIFV
SNAGTVLFCSWERISLTFVITSKCEHSHIRSLRLNENLNAAPEWAGAGGAGGGAQGRGVV
VLIIEQGRIAGRAVPIAGQPGTGKTAIAMGMAQALASETLFTKIAVSEIFSLKMSKTEAL
TQALGKSIGVRITEETEHIEGEVVEIQIDMPLPKSSAARMAKSGKLTLKTTEMERVYDLG
TKMIDSLRKETVTILLALFAGDTGEIKSGVREQIDVKVAEGREEGKAKIVQGVLFIDEVH
MLDIDWFSFMNRALESDLAPVLVVASNRGITRIRGTTYKSPHGIPLDLLDRLLITTKLFN
ENDIRKILQLRSEDVEIMENGLNLLTRIDLDTSLRYAMYLITSSGLVWSKRKRI
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atggatcgattgcatcaagtgtacatgatcatcctgactgacacgcgatgggttttgttc
ggctattcaggaattgcttttcaaagcgtggacccctttcaacctgattccgtgggctac
ctcattccatactgcgtactgcagcattttgtcgaccacatagcctgtcatggtcagtat
gcggggttctcattttgcatatttcgctggcaaagaatggaaacccatcatttgaggaga
tctcttggaacggccaaggatcagtctgggattttagtcaagtgggttgcagagatttgc
gaagcgaatcggatgttacgaaagggagatattatgactcgtgtggatggaatcttcgtc
tcgaacgctgggacagtactattttgctcttgggaacgcatcagtttgacttttgtgatc
accagcaaatgcgagcactcgcacatccgcagcctgaggctgaacgagaacctcaatgcg
gcccccgaatgggcaggggctggtggggcaggtggaggcgcgcaaggccgtggcgtggtg
gttctcatcatcgagcagggcaggatcgcgggccgcgccgtccccatcgcgggccagccc
ggcacggggaagaccgccatcgccatgggtatggcccaggccctcgcctcagagacgctc
ttcaccaagatcgccgtcagcgagatcttctcgctcaagatgtccaagaccgaggccctc
acgcaggccctggggaagagcatcggcgttagaattacggaggaaacagagcatatcgaa
ggcgaggttgtggagattcaaattgatatgccgctcccgaagtcgtcagctgcacggatg
gcgaagagtggcaagcttacgttgaagaccacggagatggagagggtgtatgacttgggt
accaagatgattgactcattgcggaaggagacagttacaattttgttagcattattcgct
ggtgacactggtgagattaaatcgggggtgagggagcagatcgacgtcaaggttgcggag
gggagggaagaggggaaagcaaaaattgtgcagggcgttcttttcattgacgaggtgcat
atgcttgatattgactggttttccttcatgaacagagctctcgagtcggacctcgcccca
gtccttgtggtggcgtcgaaccgcggaatcactcgtatcagggggaccacatacaagtcg
ccacatggcattccactggacttgttggataggttgcttattactaccaaactattcaac
gagaacgacattcgaaagatcttgcagctacgcagcgaagacgtggagatcatggagaac
ggactaaaccttctcacgcgtatagatctggatacctctctgagatacgccatgtatcta
atcacctcttcaggactcgtttggtcgaaaagaaagaggatatag
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